Pairwise Alignments

Query, 607 a.a., Excinuclease ABC subunit C from Pseudomonas syringae pv. syringae B728a

Subject, 640 a.a., excinuclease ABC subunit C from Caulobacter crescentus NA1000

 Score =  407 bits (1047), Expect = e-118
 Identities = 233/602 (38%), Positives = 348/602 (57%), Gaps = 22/602 (3%)

Query: 18  PGVYRMFDAEATLLYVGKAKNLKKRLASYFRKTGHAPKTGALVSRIAQIETTITGNETEA 77
           PGVYRM      +LYVGKAK+LKKR+  Y +   H  +   +V     +E   T  E +A
Sbjct: 37  PGVYRMIGEADEVLYVGKAKSLKKRVVQYAQGRFHTNRIANMVDATRAMEFITTRTEADA 96

Query: 78  LLLEQTLIKEWRPPYNILLRDDKSYPYVFLS-DNAFPRLSIHRGTKKAKGRYFGPYPSAG 136
           LLLE  LIK+ +P +N+LLRDDKS+P + +  D+  P+L  HRG    KG YFGP+ SA 
Sbjct: 97  LLLEINLIKQLKPRFNVLLRDDKSFPEIVIRRDHDAPQLRKHRGAHTIKGDYFGPFASAW 156

Query: 137 AIRESLSLLQKTFQVRQCEDSYFKNRTRPCLQYQIKRCKGPCVGLVEPEVYAEDVRHSVM 196
           A+  +L+ LQK F +R C DS + +R RPC+ YQIKRC  PC GL+  + Y   V  +  
Sbjct: 157 AVNRTLNTLQKAFLLRSCSDSVYDSRDRPCMLYQIKRCAAPCTGLIGKDDYQALVDQAEA 216

Query: 197 FLEGRSNALSDELNASMEKAAMALDFERAAELRDQVALLRRVQDQQSMDGGT-GDVDVVA 255
           FL G+S A+   +  +ME+AA  L+FERAA LRD++  L  V  +  ++  T  + DVVA
Sbjct: 217 FLRGKSRAVMATMAKAMEEAAEELEFERAARLRDRIRALSAVAQETQINPETVEEADVVA 276

Query: 256 AFVNPGGACVHLISVRGGRVLGSKNFFPQV------GIEEEVGE---VMSAFLAQYFLGG 306
             V  G ACV +   R G+  G++ +FP++        +E V E   +++AFL Q++   
Sbjct: 277 LHVEGGQACVQVFFFRAGQNWGNRAYFPRITGAADDPEDETVTEEQRIITAFLGQFY--- 333

Query: 307 IDRELPGEVIVNVINDDFPAFVDAVEELRGVEMVISHRVRGTRARWQQMAVTNAEQALTA 366
            D+ +P  ++ NV   +     +A     G ++ I+   RG +A   Q  +TNA +AL  
Sbjct: 334 DDKPIPRLILANVQPAESELLSEAFALKSGRKVEIAVPKRGEKADLVQHVLTNAREALGR 393

Query: 367 RLANRQHVASRFEALAKVLGLEDPPMRLECYDISHSSGEATVASCVVFGPEGPIKSDYRR 426
           ++A           +A+   L+ PP R+E YD SH  G   V   +V GPEG +K  YR+
Sbjct: 394 KMAEGSAQTKLLAGVAEAFKLDAPPERIEVYDNSHIQGANAVGGMIVAGPEGFMKGQYRK 453

Query: 427 FNIEG--VTAGDDYAAMHQALTRRYSRI-----KAGEGKLPDVLLVDGGKGQMSMARDVL 479
           FNI+   +T GDDY  M + L RR++R+     +  +   PD++LVDGG+GQ+  A +++
Sbjct: 454 FNIKSTELTPGDDYGMMKEVLRRRFARLVKEEEEGDDANRPDLVLVDGGQGQLDAAIEIM 513

Query: 480 NELQVPELILLGVAKGTTRKAGFETLYLNDSAHEFTLPGDSPALHLIQQIRDEAHRFAIT 539
            +L V ++ ++GVAKG  R AG E  ++      F L   SP L+ +Q++RDEAHRFAI 
Sbjct: 514 ADLGVDDIAVVGVAKGPDRDAGLERFFIPGQT-PFMLEPKSPVLYYLQRLRDEAHRFAIG 572

Query: 540 GHRARRGKTRRTSTLEGVAGVGPTRRRDLLKHFGGLQELSRASIDEIAKAPGISKKLAES 599
            HR RR    + + L+ + GVGP R++ LL  FG  + + RAS++++ K  G+S+ LAE 
Sbjct: 573 AHRTRRSMDLKKNPLDEIEGVGPGRKKALLHAFGSAKGVGRASVEDLVKVDGVSQALAER 632

Query: 600 IY 601
           I+
Sbjct: 633 IF 634