Pairwise Alignments

Query, 328 a.a., monosaccharide ABC transporter membrane protein, CUT2 family from Pseudomonas syringae pv. syringae B728a

Subject, 354 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  160 bits (404), Expect = 6e-44
 Identities = 106/338 (31%), Positives = 175/338 (51%), Gaps = 19/338 (5%)

Query: 3   TLTLTTSSTLIKVLPRLLPAVLPLLVLIILLFFAINAPGFLSWGNLSSLVLNNFVLLAIV 62
           T T  T +T   VL  L+     + +  ++ FF+I AP FLS  NL  L+  +  L A +
Sbjct: 6   TTTNATDATSGSVLLTLMKLRTFIALFAVVAFFSIFAPNFLSTANLI-LMSKHVALNAFL 64

Query: 63  AIGMNWAVAAGGIDLSVGTALDFASL---GFV---VTLNGGHGLGAAVA----VAMLAGG 112
           A+GM + +  GGIDLSVG+ +    +   G +   + L  G+ +   V     + +  G 
Sbjct: 65  AMGMTFVIITGGIDLSVGSIVGLCGMVAGGLILNGIDLQFGYTVYFNVVEVCLITLAVGI 124

Query: 113 IAGAFNAMLIAGLRISPFLATLGTLFIGTSVQQLLSDGGQPI-------YIAQGALPGIS 165
           + GA N +LI  L ++PF+ATLGTL++      LLS GGQ          +A      + 
Sbjct: 125 VIGAVNGLLITKLNVAPFIATLGTLYVARGFA-LLSSGGQTFPNLVGKPELATTGFAFLG 183

Query: 166 AVLILGVPLPLLVVGVLAALYGLILARGRLGREILALGTQPQLAYYSGLPTRRIAMQVFF 225
           +  +LG+P+ + V+ V+A     +     +GR I A+G   + A  SG+   R+ M V+ 
Sbjct: 184 SGRLLGLPVSIWVLIVVALAAAYVARYTPIGRHIFAVGGNERAARMSGIRVDRVKMFVYM 243

Query: 226 ASALACAVAGILLSSTVNAYVPMSGNAYLINAIGAVFIGTTLSRQGRPNIPGTLLGVLFI 285
            S    A+ G+++SS + A  P +GN++ +NAI A  +G T    GR  I GT++G   I
Sbjct: 244 FSGFCAAIVGLVISSELMASHPATGNSFELNAIAAAVLGGTSMSGGRGTIGGTIIGAFVI 303

Query: 286 NVIANGLLLIGWNFYWQQVATGALIFLVLAFSFTSRHL 323
            ++++GL+++G + +WQ V  G +I + +      R L
Sbjct: 304 GILSDGLVMMGISSFWQMVIKGIVIIVAVVVDQAQRRL 341