Pairwise Alignments

Query, 343 a.a., transport system permease protein from Pseudomonas syringae pv. syringae B728a

Subject, 343 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  166 bits (419), Expect = 1e-45
 Identities = 108/326 (33%), Positives = 170/326 (52%), Gaps = 13/326 (3%)

Query: 30  LTLLVV---LSSLAVGKINLSPATLLSVF---TGQADASLVFIVEQLRMPRLALAALVGA 83
           LTL V    L S+ VG +N++ +  +      + Q   ++  ++  +R+PR  L  LVGA
Sbjct: 14  LTLAVFFAGLYSITVGPMNITISDSIQSLLFRSEQLTNAIHLVIHDIRLPRTLLCLLVGA 73

Query: 84  ALAVSGLILQSIIRNPLASPDLLGITSGASAAAVLYLSFFSAALGAQ------FLPLAAI 137
            LA+ G  +Q + RNPLA P ++G++SGAS  A L +   S  + +        LP+AA 
Sbjct: 74  ILALCGTAMQGLFRNPLAEPGIIGVSSGASLGAALAIVLLSDVVSSLPWVNSLVLPIAAF 133

Query: 138 SGAGLAALVIYLLAWNQ-GASPLRMVLIGVGVSALLAAVTTFILVFSPLTTTLSAYVWLT 196
            G  L  +++Y L  ++ G S   M+L GV +SAL  A   ++   +         +W  
Sbjct: 134 IGGALTTVLVYRLGTSKFGTSVTIMLLAGVAISALAGAGIGYLNYLASDQMLRDLTLWSM 193

Query: 197 GSVYGASWPEPRALAGWLLMTLPLLALLARQVRMQQLDDALAQGIGVRVQWLRAGLLLVS 256
           GSV GA+       +  L+M        +  +    L +A A+ +GV VQ L+  ++L+S
Sbjct: 194 GSVAGATTSSILLCSVTLIMLFAYFHWRSMALNALLLGEAEARHLGVPVQKLKREMILLS 253

Query: 257 VALAGLAVAWGGAIAFVGLIAPHIAKRLMPPGFVGQALMAALIGANLVMLADLAGRTLFL 316
               G+AV+  G I FVGL+ PHI + L+ P       ++ L+GA ++ LAD+  R    
Sbjct: 254 AVGVGVAVSAAGMIGFVGLVVPHIGRMLVGPDHRNLVPVSTLLGALMLTLADMVARVAVA 313

Query: 317 PLDLPAGIFVAVLGTPFFLYLLINQR 342
           P +LP GI  A++G PFFLYLL  Q+
Sbjct: 314 PAELPIGIVTALVGAPFFLYLLFQQK 339