Pairwise Alignments

Query, 343 a.a., transport system permease protein from Pseudomonas syringae pv. syringae B728a

Subject, 381 a.a., Vitamin B12 transporter, permease component (fecCD-like) (from data) from Shewanella sp. ANA-3

 Score =  154 bits (390), Expect = 3e-42
 Identities = 125/368 (33%), Positives = 179/368 (48%), Gaps = 59/368 (16%)

Query: 19  TALTR---LLSGLA-LTLLVVLSSLAVGKINLSPATLLSVFTGQ------ADASLVF--- 65
           T LTR   L+ GLA   LL  +++ + G  N+S   +L VF  +      AD ++     
Sbjct: 18  TPLTRQQWLILGLAGFALLTPIAAASFGAANISFLDVLQVFINKLSHLFMADEAVSTSMT 77

Query: 66  --IVEQLRMPRLALAALVGAALAVSGLILQSIIRNPLASPDLLGITSGASAAAVLYLSFF 123
             IV +LR+PR+ LA + GA L+++G +LQ++ RNPLA P L GI+SGAS  AV+ L+ F
Sbjct: 78  ERIVMELRLPRIILAFVAGAGLSLAGSVLQTVTRNPLADPYLFGISSGASFGAVVMLTLF 137

Query: 124 S-----------------------AALGAQFLPLAAISGAGLAALVIYLLAWNQGASPL- 159
           +                       A L    LP  A  GA L+ L++  LA     S + 
Sbjct: 138 TGSGLFGNAGTIANSGIFSGSGTFAGLLWFSLPFGAFIGASLSVLIVLALAGLGLKSQVE 197

Query: 160 RMVLIGVGVSALLAAVTTFILVFSPLTTTLSAYVWLTGSVYGASWPEPRALAGWLLMTLP 219
           RM+L GV  S + +A+T+ +L F+    T S   W  GS          A A W L+ LP
Sbjct: 198 RMLLSGVATSFMFSALTSLLLYFASPQATASVLFWSLGSF---------AKASWSLLVLP 248

Query: 220 LLALL---------ARQVRMQQLDDALAQGIGVRVQWLRAGLLLVSVALAGLAVAWGGAI 270
            L +L          RQ+   Q  D  A  +GV V  LR  +LL+   +  + VA  G I
Sbjct: 249 SLVVLLSFFIILGWKRQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVATCGGI 308

Query: 271 AFVGLIAPHIAKRLMPPGFVGQALMAALIGANLVMLADLAGRTLFLPLDLPAGIFVAVLG 330
            FVGL+ PH  + L P       L+ AL+G   ++  D+  R L    +LP GI  A +G
Sbjct: 309 GFVGLMIPHTVRLLFPGR--QPILLTALVGGLFMVWIDVLARCLLGNQELPVGIITAAIG 366

Query: 331 TPFFLYLL 338
           + FFL +L
Sbjct: 367 SFFFLLIL 374