Pairwise Alignments

Query, 306 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

Subject, 303 a.a., ABC transporter permease subunit from Rahnella sp. WP5

 Score =  204 bits (519), Expect = 2e-57
 Identities = 113/303 (37%), Positives = 175/303 (57%), Gaps = 10/303 (3%)

Query: 4   IEKAPIGRTLLQAQSPWRRVLTEFFSSPTAVTGLVVLLIIVLVAALAPWIVVQNPYDLMQ 63
           I+ A +       +SPW      F   P A+     +L++VLVA  APW+    P+D M 
Sbjct: 11  IQAAAVASQNDDIRSPWYDFFHTFIRHPMALVSGGFILLLVLVAVFAPWLA---PFDPMT 67

Query: 64  LNVMDARMPPGSLNGDSGYTYWLGTDGQGRDLVSAIIYGLRISLWVGIGSALIAAVLGTL 123
            + M   + P          +W GTD  GRD++S IIYG RISL+VGI S  +  + G L
Sbjct: 68  PDWMALGVGPTP-------EHWFGTDDLGRDVLSRIIYGARISLYVGIFSVTLGMIAGVL 120

Query: 124 LGLVSAYVGGWLDALLMRLVDLLLSFPVILMALMILAWLGKGVGNVMLTLILLEWAYYAR 183
           LGL++ Y G WLD L+MR  D+L +FP +L+A+ ++A LG G+ NV++ + +     +AR
Sbjct: 121 LGLLAGYYGRWLDMLIMRGSDVLFAFPGMLLAIAVVAILGPGLNNVIIAVAVFSVPVFAR 180

Query: 184 TARGQALTESRREYVDAARGQGVGPLRIVIGHILPNCLPPLIVIGALQIARAITLEATLS 243
             R   L+  +  YV+A R  G     +++ HILP  L  +IV   ++I  +I   A+LS
Sbjct: 181 IVRAATLSIKQSAYVEAVRCVGAPDRVVILRHILPGTLSNVIVYFTMRIGTSILTAASLS 240

Query: 244 FLGLGVPVTEPSLGLLIANGFQYMLSNEYWISLFPGLALLITIVAINLVGDRLRDVLNPR 303
           F+GLG     P  G ++A     M++ ++ +S+FPGLA+ +T++A NL+GD LRD L+P+
Sbjct: 241 FIGLGPEPDVPEWGNILAMSRNMMMAGKWNVSVFPGLAIFLTVLAFNLLGDALRDTLDPK 300

Query: 304 LQR 306
           L++
Sbjct: 301 LKK 303