Pairwise Alignments

Query, 306 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

Subject, 301 a.a., ABC transporter permease from Rahnella sp. WP5

 Score =  198 bits (503), Expect = 1e-55
 Identities = 103/280 (36%), Positives = 168/280 (60%), Gaps = 11/280 (3%)

Query: 24  LTEFFSSPTAVTGLVVLLIIVLVAALAPWIVVQNPYDLMQLNVMDARMPPGSLNGDSGYT 83
           L +   +P    G  ++L++++VA  APWI    P+  +  ++ +A  PP +        
Sbjct: 31  LWQMACNPLTAIGGAIVLVLMIVAVFAPWIA---PFHPLVQDLNNALSPPSA-------A 80

Query: 84  YWLGTDGQGRDLVSAIIYGLRISLWVGIGSALIAAVLGTLLGLVSAYVGGWLDALLMRLV 143
           +W GTD  GRD+ S ++YG RI+L++ +  ++    LG LLG+ + Y GG  D +LMR+ 
Sbjct: 81  HWFGTDEFGRDIFSRLVYGSRITLYIVLLVSVTVGPLGLLLGVTAGYFGGKTDMVLMRVT 140

Query: 144 DLLLSFPVILMALMILAWLGKGVGNVMLTLILLEWAYYARTARGQALTESRREYVDAARG 203
           D+ +SFP +++AL  +A LG G+ +V++ + L  W   AR AR + L+  + +++ A R 
Sbjct: 141 DIFISFPSLVLALAFVAALGPGLEHVVIAITLTAWPPIARLARAETLSLRQADFISAVRL 200

Query: 204 QGVGPLRIVIGHILPNCLPPLIVIGALQIARAITLEATLSFLGLGVPVTEPSLGLLIANG 263
           QG  PLR++  HI+P CLP +I+   + +A  I   A L FLGLG    +P  G +I++G
Sbjct: 201 QGASPLRVLWRHIVPLCLPSVIIRITMNMAGIILTAAGLGFLGLGAQPPDPEWGAMISSG 260

Query: 264 FQYMLSNEYWISLFPGLALLITIVAINLVGDRLRDVLNPR 303
             YM+   +W++  PGLA+LI  +A N +GD LRD+L+PR
Sbjct: 261 RTYMMEC-WWVATIPGLAILINSLAFNFLGDGLRDILDPR 299