Pairwise Alignments

Query, 476 a.a., conserved hypothetical protein from Pseudomonas syringae pv. syringae B728a

Subject, 355 a.a., DNA polymerase IV (RefSeq) from Shewanella amazonensis SB2B

 Score = 45.4 bits (106), Expect = 3e-09
 Identities = 73/319 (22%), Positives = 125/319 (39%), Gaps = 23/319 (7%)

Query: 25  EPLALISGSAQRRVLQSVNPAARALGLKAGQSLTAAQALVPNFTTIEHDPADIERLQQLL 84
           +PLA+   S +R V+ + N  ARA G+++  +   A  L PN   +   P  +E  + + 
Sbjct: 27  KPLAVGGSSDRRGVISTCNYEARAFGVRSAMASAYALKLCPNLILV---PGRMEVYKAVS 83

Query: 85  AAWAYGFSSNVSLKYPRVL----LMEIESSLKLFGPWPVFEARLREELTTQGFRHRIVVA 140
                 FS   SL  P  L    L   + SL       + EA   +     G      V+
Sbjct: 84  QQIREIFSRYTSLIEPLSLDEAYLDVSDCSLYQGSATRIAEAIRSDIFKETGLTASAGVS 143

Query: 141 PNPIAARMLANMH--DGLSIDCPHELRRRLEQMPLERI-GLSRDTATALTRMGLRSVRQV 197
           P    A++ ++++  +G  +  P  L   +  + L +I G+ + T   L  +GL++   V
Sbjct: 144 PIKFVAKVASDLNKPNGQYVVSPDTLMHFVRALSLGKIPGVGKVTEEKLNALGLKTCADV 203

Query: 198 LALPRDTLARRFPASVLQHLDTLLGERPVALECYTPPDFFDVRIELNFDVESHQALLFPL 257
             +P+  L   F        +   G    A+  +       V   L  D+ + +A L  L
Sbjct: 204 QQVPQTLLTEHFGKFGAVLYERAHGRDERAIVSHRERKSVGVETTLPKDLHTREACLDVL 263

Query: 258 KRLIADLALFLAGRDSG--VQRFSLHLEHVPGPETVVPETVVPVGLLSAERDASMLFELA 315
             LI +L   L    SG  + +  + L+     +T +           AE  +  LFE  
Sbjct: 264 SSLIPELNRRLGRSASGRRIHKLVVKLKFDDFRQTTIES--------RAEEPSVRLFE-- 313

Query: 316 RGRLEQVLVASPVRAVRLL 334
              L Q  V +  R +RL+
Sbjct: 314 -SLLSQAFVRAEGRGIRLV 331