Pairwise Alignments

Query, 797 a.a., UvrD/REP helicase from Pseudomonas syringae pv. syringae B728a

Subject, 729 a.a., Superfamily I DNA and RNA helicases from Pseudomonas stutzeri RCH2

 Score = 68.2 bits (165), Expect = 2e-15
 Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 23/165 (13%)

Query: 502 RPLAHLMIDEFQDVSPQIVSWLRASLREIRRRGPALHTGRIAQHSSLLCVGDDWQSIYGW 561
           R   H+++DEFQD +    +WLR     + + G            SL+ VGDD QSIYGW
Sbjct: 214 RRFRHVLVDEFQDTNAVQYAWLRL----LAKGG-----------ESLMVVGDDDQSIYGW 258

Query: 562 RGSSPKYFMEFAKEFSSPATTRVMLSDNFRSHQHIIDAAEHIVRAAPAIPGKKARASGLL 621
           RG+  +   +F+++F    T R  L  N+RS   I+ AA  ++       GK+   SG  
Sbjct: 259 RGARIENLHQFSQDFPDAETIR--LEQNYRSTACILKAANALIANNQGRLGKELWTSGCE 316

Query: 622 QELLPVKVLDRDEDE---LAERVAEHYHDGDS---ILLLYRKGSE 660
            E + +     + DE   + E + +   DG S   I +LYR  ++
Sbjct: 317 GEPISLYAAFNEHDEARYVVESIEKAIRDGMSRSEIAILYRSNAQ 361



 Score = 32.3 bits (72), Expect = 1e-04
 Identities = 19/62 (30%), Positives = 34/62 (54%)

Query: 103 AQWKMIFSDTPSTYVIAGAGAGKSTSLVLRILLLHHYLGFELNAMTVVTFTRESRKDFIS 162
           AQ + + +      V+AGAG+GK+  LV RI  L+      L+++  VTFT ++  +   
Sbjct: 15  AQRQAVAAPLGRQLVLAGAGSGKTRVLVHRIAWLNQVERASLHSILSVTFTNKAAAEMRQ 74

Query: 163 KL 164
           ++
Sbjct: 75  RI 76



 Score = 31.2 bits (69), Expect = 2e-04
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 16/75 (21%)

Query: 679 GAQNRRIRTLTYHSSKGLQADAVFLLGDCQHLTVSPYKNQVYRLAGLGDTNDLQPFDTAQ 738
           G     ++ +T HS+KGL+   VFL+G  + L   P+K  +               ++ +
Sbjct: 552 GDHEDSVQLMTLHSAKGLEFPLVFLVGMEEGL--FPHKMSLE--------------ESGR 595

Query: 739 KDEVLRLAYVAITRS 753
            +E  RLAYV ITR+
Sbjct: 596 LEEERRLAYVGITRA 610