Pairwise Alignments

Query, 797 a.a., UvrD/REP helicase from Pseudomonas syringae pv. syringae B728a

Subject, 838 a.a., UvrD-helicase domain-containing protein from Pseudomonas sp. BP01

 Score = 1065 bits (2754), Expect = 0.0
 Identities = 536/797 (67%), Positives = 629/797 (78%), Gaps = 6/797 (0%)

Query: 1   MGRGLTGLRSQHAPSWSQGHADGYLNGHIEGVREGYEEGYLDGQESGRQVLVISDTRPAR 60
           +GRGLT L++QH  SW  GHA G   GH +GVREG+E G ++G E+GRQVLVI D+RP  
Sbjct: 44  LGRGLTRLQAQHRDSWFLGHATGQHTGHADGVREGFERGRVEGYEAGRQVLVIRDSRPDT 103

Query: 61  HRGPKVDDHLFDDWRLALTPELKKRIKADVAEKLPAHAQPSAAQWKMIFSDTPSTYVIAG 120
              P  DD+LFDDWRL LT ELKKR KADVA++LPA AQPSAAQWK+IFSDTPST V+AG
Sbjct: 104 AAVPGQDDNLFDDWRLPLTAELKKRFKADVAQRLPAEAQPSAAQWKLIFSDTPSTCVVAG 163

Query: 121 AGAGKSTSLVLRILLLHHYLGFELNAMTVVTFTRESRKDFISKLIDVMALWGHALEQKQA 180
           AGAGKSTSLVLR LLL HYLG+EL+AMTVVTFTRESRKDFI +L+ V ALW   L+  QA
Sbjct: 164 AGAGKSTSLVLRTLLLRHYLGYELDAMTVVTFTRESRKDFIKRLLQVFALWQINLQPVQA 223

Query: 181 REVVRTFHSRILPLVRSLPGFEQLRAFENLSSQS-SGLE-EADSNPFDLRINDAQRQQLN 238
           RE+VRTFHSRILPLVRSLPGF Q+RAFE L ++  +G E EADSNPFDLR+NDAQRQQLN
Sbjct: 224 RELVRTFHSRILPLVRSLPGFGQVRAFETLGNEMPAGREAEADSNPFDLRLNDAQRQQLN 283

Query: 239 LCYRDLYAGNERFREVMAPLYRHALQLKELDRDHPDVQKRVAVTELSSKRDEEWCDTVED 298
            CY  L   + RF E+   L   ALQLK LD ++PDVQKR  VT+L+++RDEE CD +ED
Sbjct: 284 QCYSSLLGESPRFAELAGLLRNEALQLKPLDPNNPDVQKRAQVTQLAAQRDEELCDVIED 343

Query: 299 LWIRAGAWPIKGIEPMRQAVEINGFPFSFHGYIAELDAWVVLGLDASEDQQLKRPGAKLP 358
           LW  AGAWPIKGIEP R+ V+I G  F  HG +A     VVLG D +E  Q +RPGAKL 
Sbjct: 344 LWFAAGAWPIKGIEPCRETVDIRGSRFHVHGRLAGQGPLVVLGFDPAESAQYQRPGAKLA 403

Query: 359 VWAEGVIKRTLFQAFCSKPLIWLDNYQSANEVLQSLAGEAAAGPGFDYRVKGELGAAPLL 418
           V AE  +KRTL QAFC +PLIWLDNY  A  +  SLAG+A AGPGF+Y+VKGEL  APLL
Sbjct: 404 VRAEWAVKRTLLQAFCDRPLIWLDNYAMARRLAASLAGDAVAGPGFEYKVKGELAPAPLL 463

Query: 419 DCFVTAASFIENLGLDVPSAVSEMSFASDDPDRFFFEALSLFWKAFETHLLAQSPPIMTY 478
           D FV AA+FIENLGLDV +AV+ MSF S D D  FFEAL+L+WKA E HLL QSPP+M+Y
Sbjct: 464 DAFVGAANFIENLGLDVNNAVAAMSFPSGDSDALFFEALALYWKALEAHLLDQSPPVMSY 523

Query: 479 NRMFALFGETSPENLKHVSDPMLRPLAHLMIDEFQDVSPQIVSWLRASLREIRRRGPALH 538
           NRMFALFGE +PENL+ + DP+LRPLAHLMIDEFQDVSPQIVSWLRASL EIRRRGPA+H
Sbjct: 524 NRMFALFGENNPENLRLLPDPLLRPLAHLMIDEFQDVSPQIVSWLRASLAEIRRRGPAMH 583

Query: 539 TGRIAQHSSLLCVGDDWQSIYGWRGSSPKYFMEFAKEFSSPATTRVMLSDNFRSHQHIID 598
           TGR AQHSSLLCVGDDWQSIYGWRGSSPKYFMEF+K F SPA TRVML DN+R  Q +ID
Sbjct: 584 TGRHAQHSSLLCVGDDWQSIYGWRGSSPKYFMEFSKTFPSPANTRVMLVDNYRCQQQVID 643

Query: 599 AAEHIVRAAPAIPGKKARASGLLQEL--LPVKVLDRDEDELAERVAEHYHDGDSILLLYR 656
           AAEH+V+  PAI GKKARASG   EL    VKV DRDE  L E + EHY  G+++++LYR
Sbjct: 644 AAEHLVKGTPAIAGKKARASGPAAELPGSAVKVFDRDEAALGETLIEHYQRGETVMMLYR 703

Query: 657 KGSEKARFSARLQALIDADSANGAQNRRIRTLTYHSSKGLQADAVFLLGDCQHLTVSPYK 716
           KGS++A  S  LQ+++ A++A  A+ RR+R LTYHS+KGLQADAVF+LGDCQ+LT SPYK
Sbjct: 704 KGSDRALMSEHLQSVLHAEAALPAEQRRLRQLTYHSAKGLQADAVFMLGDCQYLTSSPYK 763

Query: 717 NQVYRLAGLGDTNDLQPFDTAQKDEVLRLAYVAITRSARHCYWYIDESATSGDAVQMPKA 776
           NQVYR AGLG   D QPFDTAQK+EV RLAYVA+TR+ +HCYW+++  A +GDAV  P+A
Sbjct: 764 NQVYRQAGLGKAGDAQPFDTAQKEEVQRLAYVAVTRAVQHCYWHVE--AANGDAVAAPRA 821

Query: 777 SDRIARDKPFFEDLRNR 793
           S ++   + FFEDLR +
Sbjct: 822 SSQVDGRQAFFEDLRGQ 838