Pairwise Alignments

Query, 797 a.a., UvrD/REP helicase from Pseudomonas syringae pv. syringae B728a

Subject, 807 a.a., UvrD/REP helicase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 63.5 bits (153), Expect = 4e-14
 Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 20/139 (14%)

Query: 506 HLMIDEFQDVSPQIVSWLRASLREIRRRGPALHTGRIAQHSSLLCVGDDWQSIYGWRGSS 565
           ++++DE+QD +     WLR                    H ++ CVGDD QSIYGWRG+ 
Sbjct: 250 YILVDEYQDTNVAQYLWLRLLA---------------GGHKNICCVGDDDQSIYGWRGAE 294

Query: 566 PKYFMEFAKEFSSPATTRVMLSDNFRSHQHIIDAAEHIVRAAPAIPGKKARASGLLQELL 625
               + F K+F  P    + L  N+RS  HI+ AA  ++       GK+       QE  
Sbjct: 295 VGNILRFEKDF--PGALVIRLEQNYRSTPHILAAASGVISGNKGRLGKELWTDA--QEGE 350

Query: 626 PVKVLDR-DEDELAERVAE 643
            V+++   D DE A  + E
Sbjct: 351 KVRLIGHWDGDEEARWIGE 369



 Score = 33.9 bits (76), Expect = 4e-05
 Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 9/83 (10%)

Query: 675 DSANGAQNRRIRTLTYHSSKGLQADAVFLLGDCQHLTVSPYKNQVYRLAGLGDTNDLQPF 734
           D+  G    ++  +T H++KGL+  AVFL G         +++ ++      D    +  
Sbjct: 574 DNDKGDAGPQVSIMTLHAAKGLEFPAVFLPG---------WEDGIFPSQRSIDDQTGKVE 624

Query: 735 DTAQKDEVLRLAYVAITRSARHC 757
              + DE  RLAYV ITR+   C
Sbjct: 625 IGREADEERRLAYVGITRAEELC 647



 Score = 32.0 bits (71), Expect = 1e-04
 Identities = 25/92 (27%), Positives = 43/92 (46%)

Query: 77  ALTPELKKRIKADVAEKLPAHAQPSAAQWKMIFSDTPSTYVIAGAGAGKSTSLVLRILLL 136
           AL+   + R +A  A   P     + AQ + + S      ++AGAG GK+ +L  RI  L
Sbjct: 19  ALSLSARARAQAAGARAAPYLDTLNPAQRQAVESLDGPVLMLAGAGTGKTKALTCRIAHL 78

Query: 137 HHYLGFELNAMTVVTFTRESRKDFISKLIDVM 168
                   N +  VTFT ++ ++   ++  +M
Sbjct: 79  LLTGTARPNEILAVTFTNKAAREMKERVATLM 110