Pairwise Alignments

Query, 487 a.a., RND efflux system, outer membrane lipoprotein, NodT from Pseudomonas syringae pv. syringae B728a

Subject, 497 a.a., RND transporter from Pseudomonas fluorescens FW300-N2E3

 Score =  720 bits (1859), Expect = 0.0
 Identities = 363/471 (77%), Positives = 419/471 (88%), Gaps = 2/471 (0%)

Query: 16  RPFALGLCVVLLSACAVGPDYQKPSMAAPAQFKAAQGWRTATPSDGMGKGAWWEVYKDPQ 75
           R  +L L V++LSACA+GPDYQ+P++A PAQ+K A GWR ATPSD + +GAWWE+Y D Q
Sbjct: 24  RLLSLSLSVLMLSACAIGPDYQRPTVAEPAQYKQADGWRQATPSDSLARGAWWELYGDQQ 83

Query: 76  LNALVERLNTSNQTVAQYDAQYRQAQTLVRSSRAAFLPTLDLTTGKTRSGQGTGTSNSGT 135
           LN LVE+LN++NQTVAQ +AQYRQAQ LVRS+R AF PT+DL+ GKTRS QGTG+S+S  
Sbjct: 84  LNGLVEKLNSANQTVAQSEAQYRQAQALVRSARGAFFPTVDLSAGKTRSSQGTGSSSSSL 143

Query: 136 SA--SGIRNSYNAQLGVSWEADVWGKLRRGLEADTANAQASLADLAAMRLSLQSELVQNY 193
           S+  SGIR++YN QLGVSWEADVWGKLRRGLEAD A+AQAS ADLAAMRLS QSELVQNY
Sbjct: 144 SSTNSGIRDTYNTQLGVSWEADVWGKLRRGLEADKASAQASFADLAAMRLSQQSELVQNY 203

Query: 194 LQLRVIDEQKRLLESTVDAYQRSLTLTQNQYRAGISGSDAVAQAQTQLKSTQADLIDLAW 253
           LQLRVID+QKRLL++TV+ YQRSL +T+NQYRAG+SG DAVAQAQTQLKSTQAD++DL W
Sbjct: 204 LQLRVIDQQKRLLQATVENYQRSLQMTENQYRAGVSGKDAVAQAQTQLKSTQADMVDLIW 263

Query: 254 QRAQFENAIAVLMGMAPADFNLPASTSIPQLPQIPPGLPSQLLERRPDIAAAERSVMGAN 313
           QRAQFENAIAVL+G+ PADFNL  + +IP LPQ+P  LPSQLLERRPDIA+AERSV+ AN
Sbjct: 264 QRAQFENAIAVLIGLPPADFNLAETQNIPALPQVPLSLPSQLLERRPDIASAERSVIAAN 323

Query: 314 ANIGVARAAYYPDFTLSMSGGYSSSTFANWISLPNRFWSVGPQLALTLFDGGRRSAEVDR 373
           ANIGVA+AAYYPD TLSMSGGYSSST++N ISLPNRFWSVGP+LA+TLFDGG+RSAEVDR
Sbjct: 324 ANIGVAKAAYYPDLTLSMSGGYSSSTYSNLISLPNRFWSVGPKLAMTLFDGGQRSAEVDR 383

Query: 374 TEAVYDQTVAQYRQTVLNGFQEVENYLVQLKVYEQEAAVRQEALVSARDSLRLTNNQYKA 433
           TEA YDQTVA+YRQTVL+GF+EVENYLVQLKV E EAAVRQEAL +AR+SLRLT NQYKA
Sbjct: 384 TEAAYDQTVAKYRQTVLDGFREVENYLVQLKVMEDEAAVRQEALDAARESLRLTLNQYKA 443

Query: 434 GLIGYLDVVNVQATALSNERSVLSVLQSRLIASVQLIAALGGGWDAETGLT 484
           GLI YLDVV VQATALSNERSVL++ QSRLIASV LIAALGGGWD +T ++
Sbjct: 444 GLIAYLDVVVVQATALSNERSVLTLQQSRLIASVNLIAALGGGWDGQTQIS 494