Pairwise Alignments

Query, 487 a.a., RND efflux system, outer membrane lipoprotein, NodT from Pseudomonas syringae pv. syringae B728a

Subject, 461 a.a., efflux transporter outer membrane subunit from Pantoea sp. MT58

 Score =  451 bits (1159), Expect = e-131
 Identities = 236/456 (51%), Positives = 310/456 (67%), Gaps = 4/456 (0%)

Query: 24  VVLLSACAVGPDYQKPSMAAPAQFKAAQGWRTATPSDGMGKGAWWEVYKDPQLNALVERL 83
           V+LL  C+VGPDYQ+PS+A P  +K A+GW+ ATP D   KG WW VY D  L+ L+ ++
Sbjct: 9   VMLLCGCSVGPDYQRPSVAMPVHYKEARGWQPATPLDAQSKGEWWTVYHDATLSGLLSQV 68

Query: 84  NTSNQTVAQYDAQYRQAQTLVRSSRAAFLPTLDLTTGKTRSGQGTGTSNSGTSASGIRNS 143
           + SNQ VA Y AQYRQAQ L   SRAA  P+LD     TRSG     S+  T++S    S
Sbjct: 69  SVSNQNVATYAAQYRQAQALAAESRAALFPSLDYDGSVTRSGSHATNSSVRTTSS----S 124

Query: 144 YNAQLGVSWEADVWGKLRRGLEADTANAQASLADLAAMRLSLQSELVQNYLQLRVIDEQK 203
           + A+L  SWE D+WGKLRR LE + A+A AS A+LA + LS QSEL Q+Y QLR++D++ 
Sbjct: 125 HQAELSASWELDLWGKLRRTLEENRASASASAAELANITLSAQSELAQDYFQLRIMDQKI 184

Query: 204 RLLESTVDAYQRSLTLTQNQYRAGISGSDAVAQAQTQLKSTQADLIDLAWQRAQFENAIA 263
            L + +VDAYQ  L +  +QY+AG +    +AQAQ Q +S  A   D  WQRAQ E+AIA
Sbjct: 185 ALYQQSVDAYQHYLNVIISQYQAGTASRATLAQAQLQRESASASAQDYQWQRAQMEHAIA 244

Query: 264 VLMGMAPADFNLPASTSIPQLPQIPPGLPSQLLERRPDIAAAERSVMGANANIGVARAAY 323
           +L+G APADF+LPA+     LP IP  LP +LL+RRPDIA AER++  ANA IGVA A Y
Sbjct: 245 LLIGKAPADFSLPAAPLTATLPAIPAALPGELLQRRPDIAYAERNMAAANAAIGVAVAGY 304

Query: 324 YPDFTLSMSGGYSSSTFANWISLPNRFWSVGPQLALTLFDGGRRSAEVDRTEAVYDQTVA 383
           YPD TLS SGG S+S   +  SLPNR WS+GP L+ TL D G  SA+VD+  A +D +VA
Sbjct: 305 YPDLTLSASGGVSASVLHSLFSLPNRVWSLGPALSGTLLDAGATSAKVDQARASWDASVA 364

Query: 384 QYRQTVLNGFQEVENYLVQLKVYEQEAAVRQEALVSARDSLRLTNNQYKAGLIGYLDVVN 443
            YRQTVL   QEVE+ LV+L   + E A +Q A  +A+ S R+T  QY+AG+I YLDV  
Sbjct: 365 TYRQTVLTAMQEVEDKLVELNTLQGEIAAQQRATDAAQTSARVTRLQYEAGMIDYLDVAT 424

Query: 444 VQATALSNERSVLSVLQSRLIASVQLIAALGGGWDA 479
            + ++LS ++S+L++  ++ ++SV LIAALGGGW A
Sbjct: 425 TENSSLSAQQSLLTLATTQWVSSVALIAALGGGWQA 460