Pairwise Alignments

Query, 487 a.a., RND efflux system, outer membrane lipoprotein, NodT from Pseudomonas syringae pv. syringae B728a

Subject, 501 a.a., efflux transporter outer membrane subunit from Ralstonia sp. UNC404CL21Col

 Score =  442 bits (1137), Expect = e-128
 Identities = 233/482 (48%), Positives = 324/482 (67%), Gaps = 10/482 (2%)

Query: 9   SRPTGLIRPFALGLCV-VLLSACAVGPDYQKPSMAAPAQFKAAQGWRTATPSDGMGKGAW 67
           +R T  +R   L L    L+SACAVGPDY++P+   P Q+K A  W+ A PSD + +G W
Sbjct: 2   TRGTQALRTSLLALAACALVSACAVGPDYKRPTAEVPQQYKEAGDWKIADPSDAIARGKW 61

Query: 68  WEVYKDPQLNALVERLNTSNQTVAQYDAQYRQAQTLVRSSRAAFLPTLDLTTGKTRSGQ- 126
           WE++ DPQLNAL E++  +NQ +   +AQYRQAQ LV+S++A+F PTL  +   TRS   
Sbjct: 62  WEIFNDPQLNALEEQVAAANQNILVAEAQYRQAQALVQSAQASFFPTLGASASATRSRSV 121

Query: 127 GTGTSNSGTSASG---IRNSYNAQLGVSWEADVWGKLRRGLEADTANAQASLADLAAMRL 183
            T  +  G+ ++G   + NS +  L  SWE D+WG++RR +E++ A+AQAS  DL++  L
Sbjct: 122 RTSVNPDGSLSTGNPSLLNSQSLSLNASWELDLWGRIRRSVESNKASAQASAGDLSSALL 181

Query: 184 SLQSELVQNYLQLRVIDEQKRLLESTVDAYQRSLTLTQNQYRAGISGSDAVAQAQTQLKS 243
           S Q+ L QNY QLRV D QK +L+ TV  Y+R L LTQNQY  G++    V  AQTQLK 
Sbjct: 182 SAQATLAQNYFQLRVTDTQKAVLQRTVADYERFLKLTQNQYAVGVAQRSDVLTAQTQLKQ 241

Query: 244 TQADLIDLAWQRAQFENAIAVLMGMAPADFNLPASTS-----IPQLPQIPPGLPSQLLER 298
           +QA L+D    RAQ E+AIAVL+G  PA+F+L  +T+     +P LP IP  +PS +LER
Sbjct: 242 SQALLLDTEVTRAQLEHAIAVLIGKPPAEFSLAPATATTVADLPALPAIPLEVPSAVLER 301

Query: 299 RPDIAAAERSVMGANANIGVARAAYYPDFTLSMSGGYSSSTFANWISLPNRFWSVGPQLA 358
           RPDIAAAER +  ANA IGVA+AAY+P  TL  S G +++T +   +LP+R WS+GP LA
Sbjct: 302 RPDIAAAERRMAAANAQIGVAKAAYFPTLTLGASAGLAANTLSRLATLPSRVWSIGPTLA 361

Query: 359 LTLFDGGRRSAEVDRTEAVYDQTVAQYRQTVLNGFQEVENYLVQLKVYEQEAAVRQEALV 418
            TLFDGG R+A VD+  A YD +VA YRQTVL  FQ+VE+ L  L+   QE  V+ +A+ 
Sbjct: 362 ATLFDGGARAAAVDKAGAAYDASVATYRQTVLGAFQDVEDNLAALRWQTQEFGVQADAVK 421

Query: 419 SARDSLRLTNNQYKAGLIGYLDVVNVQATALSNERSVLSVLQSRLIASVQLIAALGGGWD 478
           +A+++ +L  N+Y+AG + +L+V+  QATA S ER++L++   +  A+V L+ ALGGGW 
Sbjct: 422 AAQEAAQLNLNRYRAGTVSFLEVITAQATAYSAERTLLTLQGKQYSAAVLLVKALGGGWH 481

Query: 479 AE 480
            E
Sbjct: 482 GE 483