Pairwise Alignments

Query, 1035 a.a., Acriflavin resistance protein from Pseudomonas syringae pv. syringae B728a

Subject, 1036 a.a., multidrug efflux RND transporter permease subunit MuxC from Pseudomonas aeruginosa PA14

 Score = 1158 bits (2996), Expect = 0.0
 Identities = 611/1039 (58%), Positives = 777/1039 (74%), Gaps = 7/1039 (0%)

Query: 1    MNLSAPFIRRPVATVLLSLAIMLLGAVSFRLLPVAPLPNMDFPVIVVSASLAGASPEVMA 60
            M+LS PFIRRPVAT LL+LA++L G +SF LLPVAPLPN+DFP IVVSASL GASPE MA
Sbjct: 1    MSLSTPFIRRPVATTLLTLALLLAGTLSFGLLPVAPLPNVDFPAIVVSASLPGASPETMA 60

Query: 61   STVATPLERSLGSIAGVNTMTSNSSQGTTRIILQFDLDRDINGAAREVQAAINASRNLLP 120
            S+VATPLERSLG IAG++ MTS+SS G+T ++L FDL++DI+GAAREVQAAIN + +LLP
Sbjct: 61   SSVATPLERSLGRIAGISEMTSSSSLGSTTVVLVFDLEKDIDGAAREVQAAINGAMSLLP 120

Query: 121  SGMRSMPTYKKVNPSQAPIMVLSMTSTVLEKGQLYDLASTILSQSLSQVSGVGEVQIGGS 180
            SGM + P+Y+K NPS  PIMVL++TS    +G++YDLAST+L+  LSQV GVG+V IGGS
Sbjct: 121  SGMPNNPSYRKANPSDMPIMVLTLTSETQSRGEMYDLASTVLAPKLSQVQGVGQVSIGGS 180

Query: 181  SLPAVRIELEPQMLSQYGVSLDDVRTAITGANVRRPKGFVEDDQHNWQVQANDQLETAKD 240
            SLPAVR++L P  +SQYG+SLD VRTAI  AN   PKG VE D  +WQV ANDQL  A++
Sbjct: 181  SLPAVRVDLNPDAMSQYGLSLDSVRTAIAAANSNGPKGAVEKDDKHWQVDANDQLRKARE 240

Query: 241  YSPLIIRYK--DGATLRLKDVAKVSDAVEDRYNSGFYNNDRAVLLVVNRQAGANIIETVA 298
            Y PL+I Y   +GA +RL DVAKVSD+VED  N+GF ++  AVLL+V RQ GANIIE   
Sbjct: 241  YEPLVIHYNADNGAAVRLGDVAKVSDSVEDVRNAGFSDDLPAVLLIVTRQPGANIIEATD 300

Query: 299  QIKAQLPALRAVLPASVSLNIAMDRSPVIKATLHEAEMTLLIAVVLVVMVVFLFLGSFRA 358
             I AQLP L+ +L   V LN+  DRSP I+A+L EAE+TLLI+V LV++VVFLFL + RA
Sbjct: 301  AIHAQLPVLQELLGPQVKLNVMDDRSPSIRASLEEAELTLLISVALVILVVFLFLRNGRA 360

Query: 359  SLIPTLAVPVSLVGTFAIMHLFGFSLNNLSLMALILATGLVVDDAIVVLENISRHIHNGL 418
            +LIP+LAVPVSL+GTFA+M+L  FSLNNLSLMALI+ATG VVDDAIVV+ENI+R I  G 
Sbjct: 361  TLIPSLAVPVSLIGTFAVMYLCDFSLNNLSLMALIIATGFVVDDAIVVVENIARRIEEGD 420

Query: 419  DPMKAAFLGAKEVGFTLLSMNVSLVAVFISILFMGGLVESLFREFSITLSVSIIVSLIVS 478
             P++AA  GA++VGFT+LSM +SLVAVFI +L MGGL   LFREF++TLS +I+VSL+VS
Sbjct: 421  PPIQAAITGARQVGFTVLSMTLSLVAVFIPLLLMGGLTGRLFREFAVTLSAAILVSLVVS 480

Query: 479  LTLTPMLCARWLKPREAHGENAFQRWSERVNDRMVAGYDRSLGWVMRHRRLTLLSLLITV 538
            LTLTPMLCAR L+P +     +  R S+R     +  Y  SLGW + H RL ++ +L  +
Sbjct: 481  LTLTPMLCARLLRPLKRPEGASLARRSDRFFAAFMLRYRASLGWALEHSRLMVVIMLACI 540

Query: 539  VVNIALYVVVPKTFLPQQDTGQLMGFVRGDDGLSFSVMQPKMETFRLSILADPAVESVAG 598
             +N+ L+VVVPK FLPQQD+G+L G+   D  +SF  +  KM  +R  + +DPAVE+V G
Sbjct: 541  AMNLWLFVVVPKGFLPQQDSGRLRGYAVADQSISFQSLSAKMGEYRKILSSDPAVENVVG 600

Query: 599  FIGGSG--GTNNAFMIVRLKPIAERKLSAEKVVERLRKNMPHVPGGRLFLAPDQDLQLGG 656
            FIGG     +N     V LKPI ER    EKV+ RLR+ +  VPG  L+L   QD++LGG
Sbjct: 601  FIGGGRWQSSNTGSFFVTLKPIGERD-PVEKVLTRLRERIAKVPGAALYLNAGQDVRLGG 659

Query: 657  GREQTSSQYQYIVQSADLGSLRLWYPKIVAALKSIPELTAIDAREGRGAQQVTLVVNRDT 716
                +++QY++ ++S DL  LR W PK+ AA++ +P+L  +++       Q  LV++RD 
Sbjct: 660  --RDSNAQYEFTLRSDDLTLLREWAPKVEAAMRKLPQLVDVNSDSQDKGVQTRLVIDRDR 717

Query: 717  AKRLGIDMNMVTAVLNNAYSQRQVSTIYDSLNQYKVVMEVNPKYAQDPVTLEQVQVITAD 776
            A  LGI++ MV AVLN+++ QRQVSTI++ LNQY+VVMEV+ +Y Q P  L QVQVI  D
Sbjct: 718  AATLGINVEMVDAVLNDSFGQRQVSTIFNPLNQYRVVMEVDQQYQQSPEILRQVQVIGND 777

Query: 777  GQRVPLSSIAHYERSLANDRVSHDGQFAAENISFDLAEGASLDKATVAIERAIAAIGLPS 836
            GQRVPLS+ +HYE S A   V+H GQFAA  +SF+LA GA +     AI +A+  + +P 
Sbjct: 778  GQRVPLSAFSHYEPSRAPLEVNHQGQFAATTLSFNLAPGAQIGPTREAIMQALEPLHIPV 837

Query: 837  DIISKMAGTANAFASTQKSQPWMILGALLAVYLVLGILYESYIHPLTILSTLPSAGVGAL 896
            D+ +   G A A   TQ   PW+IL ALLAVY+VLGILYESY+HPLTILSTLPSAGVGAL
Sbjct: 838  DVQTSFEGNAGAVQDTQNQMPWLILLALLAVYIVLGILYESYVHPLTILSTLPSAGVGAL 897

Query: 897  LTIYVLGSEFSLISLLGLFLLIGVVKKNAIMMIDLALHLEREQGMTPQESIRSACLQRLR 956
            L + +  SE SLI+L+G+ LLIG+VKKNAIMMID AL  ER  G++P+E+I  AC+ R R
Sbjct: 898  LALILCRSELSLIALIGIILLIGIVKKNAIMMIDFALEAERNHGLSPREAILEACMMRFR 957

Query: 957  PILMTTMAAILGALPLLLSTAEGAEMRKPLGLTIIGGLIFSQVLTLYTTPVVYLYLDRLR 1016
            PI+MTT+AA+LGALPL+      A +R+PLG+TI+GGLI SQ+LTLYTTPVVYLYLDRLR
Sbjct: 958  PIMMTTLAALLGALPLIFGIGGDAALRRPLGITIVGGLIGSQLLTLYTTPVVYLYLDRLR 1017

Query: 1017 HRYNKWRGVRTDAALETPL 1035
            H  N+ RGVRTD ALETPL
Sbjct: 1018 HWVNQKRGVRTDGALETPL 1036