Pairwise Alignments

Query, 123 a.a., Response regulator receiver from Pseudomonas syringae pv. syringae B728a

Subject, 928 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score = 77.4 bits (189), Expect = 4e-19
 Identities = 49/121 (40%), Positives = 69/121 (57%), Gaps = 7/121 (5%)

Query: 5   ARTILVVEDDAIVRMLIVDVLEELEYKVLEAEDATSALTFVADDSNHIDLLMTDQGLP-D 63
           + TILVVEDD  V+  ++++L  L Y VL A DA SAL+ +      IDLL TD  +P  
Sbjct: 690 SETILVVEDDLPVQATVIELLTGLGYSVLRANDAQSALS-ILQSGLPIDLLFTDVVMPGP 748

Query: 64  MKGTALAKKVIELRPQLPVLFASGYSENIDV-----PPGMHSIGKPFSIDQLRDKVKSIL 118
           +  T LA++   L P + VLF SGY+ N  V      PG+  + KP+  + L  KV+ +L
Sbjct: 749 LSSTELARQARLLLPDIAVLFTSGYTRNAVVHGGRLDPGVELLSKPYRQEDLARKVRQLL 808

Query: 119 G 119
           G
Sbjct: 809 G 809



 Score = 45.4 bits (106), Expect = 2e-09
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 8   ILVVEDDAIVRMLIVDVLEELEYKVLEAEDATSALTFVADDSNHIDLLMTDQGLPDMKGT 67
           ++VVED   +  L  +++EEL ++      A + L   A      D L+ D  LP   G 
Sbjct: 823 VMVVEDQPQLLALTCEMVEELGHRACGY--ANAELAAQALHEQRFDQLLLDVNLPGRSGP 880

Query: 68  ALAKKVIELRPQLPVLFASGYSENIDVPPGMHSIGKPFSIDQLRD 112
             A + +  +P L ++F SG    I+      S+ KPFS DQL +
Sbjct: 881 EFAAEALATQPWLRLVFVSGEGR-IESKLPARSLPKPFSFDQLAE 924