Pairwise Alignments

Query, 123 a.a., Response regulator receiver from Pseudomonas syringae pv. syringae B728a

Subject, 648 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score = 71.6 bits (174), Expect = 2e-17
 Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 6/116 (5%)

Query: 8   ILVVEDDAIVRMLIVDVLEELEYKVLEAEDATSALTFVADDSNHIDLLMTDQGLPDMKGT 67
           +LVVED   VRML+ + L E  Y+  +A D  +A   +  D++ I+LL+TD GLP + G 
Sbjct: 531 VLVVEDMPSVRMLVAETLIEAGYRCSQAGDVETAQALLEADTS-IELLLTDVGLPRLSGR 589

Query: 68  ALAKKVIELRPQLPVLFASGYSENIDVPPG-----MHSIGKPFSIDQLRDKVKSIL 118
            LA+     RP LPV+  +GY+EN     G     M  + KPF    L  K++ +L
Sbjct: 590 QLAQWARRARPGLPVILITGYAENAASREGFIDERMDLVLKPFEAADLLSKIRGLL 645



 Score = 44.3 bits (103), Expect = 3e-09
 Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 9/104 (8%)

Query: 8   ILVVEDDAIVRMLIVDVLEELEYKVLEAEDATSALTFVADDSNHIDLLMTDQGLPDMKGT 67
           +L+V+D+A  R  +  VLE   Y+VLEA   +  L  VA      D L+ D  LPDM G 
Sbjct: 7   LLIVDDNATTRYAMRRVLERHGYQVLEAGTGSEGLALVAG----ADALILDVNLPDMSGF 62

Query: 68  ALAKKVIELRPQ---LPVLFASGYS-ENIDVPPGMHSIGKPFSI 107
            +A++ +   P    LP++  S  S E  D+  G+ + G  + I
Sbjct: 63  DIARQ-LRADPNTALLPLIHVSAASIETNDIITGLDAGGDAYLI 105