Pairwise Alignments

Query, 307 a.a., transcriptional regulator, AraC family from Pseudomonas syringae pv. syringae B728a

Subject, 295 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  106 bits (265), Expect = 6e-28
 Identities = 72/255 (28%), Positives = 124/255 (48%), Gaps = 6/255 (2%)

Query: 44  HFHKEYELHLIVASSGKVFVGDYIGNFNPASLFLTGPNLPHNWISQIDDGEVVPKRDMLV 103
           H H+E ++  IV   G VF G+ I NF P  +F+ G N+PH   S  +         + V
Sbjct: 31  HRHEEVQITWIVKGRGIVFSGNNIHNFRPGDIFVIGANVPHLLKSDAEHFSAASTGQVEV 90

Query: 104 NFTDELLESGNQVFAELKTLTP---LLERARYGIEFRCKRTIRQAMKQMQKIADSRGITR 160
                 L++G     EL  +     +      G +   K  ++ A K ++KI  +     
Sbjct: 91  YSIYFNLKTGIGSLFELPEMNETRHVFNHYSNGFKLSGKSAVKIARK-IEKINQANDEQI 149

Query: 161 LGHFFILLELLAASDDYQLLSGTAVAHTADEHSVDRTNRAVDYIFAHYGRELPLEEVAEY 220
           L  F  L+     +D  + L         +E+   + ++ ++YI  +Y + + LEEV+  
Sbjct: 150 LISFIDLINEFRFADQLESLCSIDYLPNMNENENVQLSKVINYIMQYYHKPITLEEVSNQ 209

Query: 221 LGMKPTYFSRVFKQATGRCFVEFVNRLRISKSCELLADGDKP--VTDVCFESGFNNISNF 278
             M    F R FK+ TGR F+ F+N +RI++ C+ LA G K   + +V +++GF +++NF
Sbjct: 210 AFMSSGAFCRYFKRHTGRNFITFLNEVRINEVCKNLASGKKADYIANVAYKAGFKSMTNF 269

Query: 279 NRRFQQLKGMTPSHY 293
           NR F+ + G++P  Y
Sbjct: 270 NRVFKNVVGISPRAY 284