Pairwise Alignments

Query, 294 a.a., murein-DD-endopeptidase, Serine peptidase, MEROPS family S11 from Pseudomonas syringae pv. syringae B728a

Subject, 316 a.a., D-alanyl-D-alanine endopeptidase from Vibrio cholerae E7946 ATCC 55056

 Score =  338 bits (868), Expect = 7e-98
 Identities = 168/260 (64%), Positives = 206/260 (79%)

Query: 23  LASGSAMVIDLQTDKVLYSSNPDVIVPIASVTKLMTAMVVLDAKQPMDEVIPVNISQTPE 82
           L++ SA+VIDL+T++++YS+NPD + PIASVTKLMTA+V LDAK PMD  +P+ I    E
Sbjct: 45  LSANSALVIDLKTNEIIYSNNPDAVKPIASVTKLMTAIVTLDAKLPMDAKLPITIKDAKE 104

Query: 83  MKGVFSRVKLGSEMNRRDMLLITLMSSENRAAASLAHSYPGGYPAFILAMNAKAKALGMK 142
           MKGV SRVK+GSE++R+DMLL+TLMSSENRAAASLAH YPGGY AFI AMNAKAKALGMK
Sbjct: 105 MKGVHSRVKIGSEISRKDMLLLTLMSSENRAAASLAHHYPGGYKAFIKAMNAKAKALGMK 164

Query: 143 HTAYVEPTGLSVYNVSTARDLTKLVMAARKYPLLSELSTTEQKTVTFRKPTYTLGFSNTD 202
           +T +VEPTGLS  NVSTARDL  L+ A++KYPLL +LS T++KTVTF KP YTL F NT+
Sbjct: 165 NTRFVEPTGLSAKNVSTARDLVVLLKASKKYPLLGKLSATDKKTVTFSKPRYTLDFRNTN 224

Query: 203 HLVRKDNWDIKLTKTGFTNQAGHCLVLLTSMANRPVSVVILDAFGKYTHFADASRIRKWM 262
            LV  DNW I LTKTGFTN AGHCLV+ T M  R V+ V+LD  GK +   DA+R+R W+
Sbjct: 225 RLVHNDNWKIDLTKTGFTNAAGHCLVMRTQMGRRQVAFVVLDTKGKLSPVGDANRLRTWI 284

Query: 263 ETGQSGPAPEVALQYKKEKN 282
           ETG+  P    A QYKK+++
Sbjct: 285 ETGKVTPLSSEAKQYKKQRS 304