Pairwise Alignments

Query, 318 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

Subject, 393 a.a., Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  170 bits (431), Expect = 5e-47
 Identities = 97/301 (32%), Positives = 156/301 (51%), Gaps = 12/301 (3%)

Query: 7   MTAVAPRQSMPAGGASSTAGAASQKAPGMPPSPSLAQRWRGSRNLLPALIFLGLFFFAPL 66
           +TA A R   PA     +  ++  +   + P  S  + W+      PA  +   +  + L
Sbjct: 94  ITATARRYQWPAKQQPVSGESSRARLTAIDPRWSTPELWQAFERASPA--YTSYYLLSAL 151

Query: 67  -IALLLRGVLEPVPGLGNYEQLFANSAYSRVLLNTFSVAGLVTLFSLLLGFPLAWVITLV 125
            +     G+    P             Y  +   T  +A +V++  LLLGFP A ++   
Sbjct: 152 DLERTAHGIQRVAPD---------KRVYLDLTFKTLKIAFVVSVLCLLLGFPFAVLLVKA 202

Query: 126 PRGWGRWILNIVLLSMWTSLLARTYSWLVLLQASGVVNKALMAMGITDQPLEMVHNLTGV 185
            R +   ++  V+L  WTSLLART +W+V+LQ  G+VN  L+ +G+ +QPL M+ +  GV
Sbjct: 203 SRPFQMLLILAVMLPFWTSLLARTTAWIVVLQEKGIVNTLLLKLGLIEQPLPMIFDALGV 262

Query: 186 VIGMSYIMIPFIVLPLQATMQAIDPMVLQAGSICGASPWSNFFRVFLPLCRPGLFSGGLM 245
            I M +I++PF VLPL + M+ I    ++A    GA P   F  V+LP+   G+ SG L+
Sbjct: 263 YIVMVHILLPFTVLPLYSVMKGIPAHYMRASQSLGAHPVRGFLHVYLPMTLTGIGSGTLL 322

Query: 246 VFVMSLGYYVTPALLGGAQNMMLPEFIVQQVQSFLNWGLASAAAALLVLITLVLFYFYLK 305
            F+++ GYYVTP L+G A+  ML  FI     + +NWG+ASA   +L+L  + ++    +
Sbjct: 323 TFIVAAGYYVTPTLVGSAREQMLGYFIAFYTNTTVNWGMASALGLVLILCVMAIYLVAAR 382

Query: 306 L 306
           L
Sbjct: 383 L 383