Pairwise Alignments

Query, 290 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

Subject, 309 a.a., ABC transporter permease from Pseudomonas aeruginosa PA14

 Score =  179 bits (454), Expect = 7e-50
 Identities = 103/282 (36%), Positives = 164/282 (58%), Gaps = 12/282 (4%)

Query: 5   SEMRQGGRGYWLSAPALALYIGLLVLPLGLTLVLSFNVFDYQVGVKSDSYTLANYV---- 60
           +E RQ  R   LS+PA+ + +  LV+PLG+   +S        GVK   ++L  Y+    
Sbjct: 13  AERRQLRRRLLLSSPAMLMLVLFLVIPLGIMFAVSIQQSGDYGGVKWGQHSLEAYLNFLW 72

Query: 61  ------AVVTDSYFYEIFLRTFWISALVTLLCVLIGVPEAYILSRMGTPWRSIFLILILT 114
                 ++V ++ +  IF R+FW+S L TL C+ +G P A  L+      R++ L L+  
Sbjct: 73  ERDLDDSLVFNADYLGIFQRSFWLSLLTTLGCLALGFPTALYLALQPERRRNLLLFLVTV 132

Query: 115 PLLISVVVRAFGWSLLLGADGLINQVIQFMG--GRPVKLLYTPFAVVIALVHVMLPFMII 172
           P   +++VR + W LLL   GL++  +Q +G     + LLYT  AV+I L++  LPFM++
Sbjct: 133 PFWTNLLVRVYAWILLLRNGGLVDAGLQGIGLTDTGLGLLYTDNAVIIGLLYTYLPFMVL 192

Query: 173 PVWTSLQKLDPTAEQAALSLGASQAKVMRLIVLPQVMPGVLSGSLIVFGLAASSFAIPGL 232
           P++TSL+K+D    +A   LGA++ K +R +++P  MPG+++G ++VF  A  S+ IP L
Sbjct: 193 PIYTSLEKMDWRLVEATFDLGANRWKALRRVIVPLAMPGIVAGCILVFIPALGSYIIPEL 252

Query: 233 LGGRRLKMVATVIYDQYLSELNWPMGATLAVALLLVNLLVML 274
           LGG +  M+  +I  Q+ +  NWP GA L+ ALL   LL ML
Sbjct: 253 LGGGKALMIGNLIQLQFGTAHNWPFGAALSFALLAFVLLAML 294