Pairwise Alignments
Query, 913 a.a., YD repeat protein from Pseudomonas syringae pv. syringae B728a
Subject, 1625 a.a., Rhs family protein from Pseudomonas fluorescens FW300-N1B4
Score = 197 bits (501), Expect = 5e-54
Identities = 209/782 (26%), Positives = 321/782 (41%), Gaps = 116/782 (14%)
Query: 54 AYDAQGNLTTVTNALGQVYALASFDSYGNPQSITDPNGVMTTLSYTPQGWLASLTIDSST 113
AYD G L + LG V +D G ++ P T+ Y G+L + +
Sbjct: 745 AYDDNGRLVAEQDPLGAVTEYR-YDDVGRLVTLVPPQDEPTSYEYR-NGFLHACYRGQAA 802
Query: 114 TQYAYNEVGDLLQVTTADGNWVKYSYDDARRLIGVR-----------NRLGESINYTL-- 160
+Y N GD+ + T DG Y +D RL+ +R N LG+ + TL
Sbjct: 803 WKYQRNAQGDVTEATDPDGQVTHYQHDAQGRLLSIRFPDNSRHVFIWNGLGQLLEETLPD 862
Query: 161 --------DPMGNRTAERTKDANGAVVHLQRRVFDELGRLIRVVGAGDQTQRYGYDLNDN 212
D +G +T + D +GA+ Q +D +GRL++ ++ + Y+
Sbjct: 863 GSQRRFSYDALGRQTTRQ--DEHGALTQYQ---WDAVGRLVQATLPTGASRAFSYNAYGK 917
Query: 213 QSSDTTPRNNKTQQAF-DALNRVSKIVDPLQGVTALGYNSDDK---VTKVVDPRGVTTLY 268
+++ T+ + D L+ VS+ ++P T L Y D+ +T++ + G
Sbjct: 918 ITAERDELGRVTRYEYADDLHLVSRRINP--DGTQLRYRYDNAQRLLTEIENEAGEHYRL 975
Query: 269 TYDSLGNRISSKSPDGGTSTYAYDEANNLIRST----DARGVVTEYAYDALNRLTSKSYP 324
Y G DG + Y+YD +L+ T D ++T Y D+ RL K+ P
Sbjct: 976 DYTPGGLIRQETGFDGRRTAYSYDLNGHLLEKTEFGDDDSQLITGYQRDSAGRLLVKTLP 1035
Query: 325 ATPALNIKFLYDQTADGNLGIGHLTGLQDSAG-VLTYTYDAKGNLVRQHRSVGVNSGDYY 383
+ +K+ YD+ +G L + D L + YDA+ L+ +H+S G
Sbjct: 1036 --DGVKVKYRYDR-------LGRLVSVDDGHDHPLEFEYDAQDRLITEHQSWG------- 1079
Query: 384 ETLNYGYDAARNLVQIGYPSNINLTFTRNSAAQVTGVKLAIGNKTATLASNISYQPFGPV 443
TL Y YDA L + P N L + +T + L N T + FG
Sbjct: 1080 -TLRYRYDACGRLNHLRLPDNSKLDYHHAKGGALTAIDL---NGTRLTRHQFA---FGRE 1132
Query: 444 NSLTWGNGILLSRTYDQDYQ-------LTQQQVGNWQTTYRYDADSNISETATSLWGAVQ 496
G L+ Y D Q ++QQQ ++ Y Y A+ N+ A + G
Sbjct: 1133 QQRQQGQ---LTSEYSYDDQGRLKAHAVSQQQQALYRRDYAYSANGNLDHIADTRHGQRS 1189
Query: 497 YEYDALGRLTQEQTNSVKKAYSFDATGNRTQRTTTNLTTSDATETQSLTYASDSNRVTSI 556
Y+YD+L RL + + + + SF +NL D ++ NR+ +
Sbjct: 1190 YQYDSLDRLIRVRHSRDQLPESF------AHDPASNLLMQDRPGPATVK----GNRLLML 1239
Query: 557 NGSTLPVDAAGNHTQINGRRFT---------YDSQGRLSEVYQANIYKIADYKYNALGQR 607
DA GN I RR T YD Q RL V + + Y+Y+A G+R
Sbjct: 1240 GDCHFDYDAFGN--LIRERRGTAQKLVTEYRYDGQHRLIGVMLTDS-RCVSYRYDAFGRR 1296
Query: 608 IIKRAYVMGSQALAGTTTYLYDPSGKLIGQTLYDGNGQKTSGQYWFWLDNMPLAQLTANF 667
I S+ + G TT + L+ + D + F PLA L
Sbjct: 1297 I--------SKTVEGKTTEFFWQGDHLVAEHSQDHHRSYIYEPGSF----RPLAMLDGKG 1344
Query: 668 STLGEVSSSKLIYLHVDHLNTPRLATDSSQALLWRWNSDAYG-VGSPEEDVDGDGKATTI 726
+ Y +DHL TP+ TD S ++W AYG + D +
Sbjct: 1345 PR-----QACPFYYQLDHLGTPQELTDYSGDIIWAARYTAYGRLTRLNRDTH---QVLDQ 1396
Query: 727 ALRFPGQIYDAQTQLSYNYYRDYNPDTGRYVQSDPIGLGGGLNTYAYVNANPMSFIDPMG 786
LRF GQ +DA+T L YN +R YNPD GRY+ DP L GGLN Y Y NP ++DP+G
Sbjct: 1397 PLRFQGQYFDAETGLHYNRHRYYNPDVGRYLTPDPSKLAGGLNGYQYTR-NPTGWVDPLG 1455
Query: 787 LA 788
L+
Sbjct: 1456 LS 1457
Score = 82.8 bits (203), Expect = 2e-19
Identities = 124/503 (24%), Positives = 183/503 (36%), Gaps = 78/503 (15%)
Query: 50 VTQYAYDAQGNLTTVT-----------NALGQVYALA---------SFDSYGNPQSITDP 89
VT Y +DAQG L ++ N LGQ+ S+D+ G + D
Sbjct: 823 VTHYQHDAQGRLLSIRFPDNSRHVFIWNGLGQLLEETLPDGSQRRFSYDALGRQTTRQDE 882
Query: 90 NGVMTTLSYTPQGWLASLTIDSSTTQ-YAYNEVGDLLQVTTADGNWVKYSYDDARRLIGV 148
+G +T + G L T+ + ++ ++YN G + G +Y Y D L+
Sbjct: 883 HGALTQYQWDAVGRLVQATLPTGASRAFSYNAYGKITAERDELGRVTRYEYADDLHLVSR 942
Query: 149 R-NRLGESINYTLDPMGNRTAERTKDANGAVVHLQRRVFDELGRLIRVVGAGDQTQRYGY 207
R N G + Y D N T+ N A H R + G + + G + Y Y
Sbjct: 943 RINPDGTQLRYRYD---NAQRLLTEIENEAGEH-YRLDYTPGGLIRQETGFDGRRTAYSY 998
Query: 208 DLNDNQSSDTTPRNNKTQQAFDALNRVSKIVDPLQGVTALGYNSDDKVTKVVDPRGVTTL 267
DLN + L + D Q +T +S ++ P GV
Sbjct: 999 DLNGH-----------------LLEKTEFGDDDSQLITGYQRDSAGRLLVKTLPDGVKVK 1041
Query: 268 YTYDSLGNRISSKSPDGGTSTYAYDEANNLIRSTDARGVVTEYAYDALNRLTSKSYPATP 327
Y YD LG +S + YD + LI + G + Y YDA RL P
Sbjct: 1042 YRYDRLGRLVSVDDGHDHPLEFEYDAQDRLITEHQSWGTL-RYRYDACGRLNHLRLPD-- 1098
Query: 328 ALNIKFLYDQTADGNLGIGHLTGL-------------QDSAGVLT--YTYDAKGNLVRQH 372
N K Y G L L G Q G LT Y+YD +G L +
Sbjct: 1099 --NSKLDYHHAKGGALTAIDLNGTRLTRHQFAFGREQQRQQGQLTSEYSYDDQGRL--KA 1154
Query: 373 RSVGVNSGDYYETLNYGYDAARNLVQIGYPSNINLTFTRNSAAQVTGVKLAIGNKTATL- 431
+V Y +Y Y A NL I + ++ +S ++ V+ + +
Sbjct: 1155 HAVSQQQQALYRR-DYAYSANGNLDHIADTRHGQRSYQYDSLDRLIRVRHSRDQLPESFA 1213
Query: 432 ---ASNISYQPFGPVNSLTWGNGILLSRTYDQDY----QLTQQQVGNWQ---TTYRYDAD 481
ASN+ Q P + GN +L+ DY L +++ G Q T YRYD
Sbjct: 1214 HDPASNLLMQD-RPGPATVKGNRLLMLGDCHFDYDAFGNLIRERRGTAQKLVTEYRYDGQ 1272
Query: 482 SNISETATSLWGAVQYEYDALGR 504
+ + V Y YDA GR
Sbjct: 1273 HRLIGVMLTDSRCVSYRYDAFGR 1295
Score = 69.3 bits (168), Expect = 2e-15
Identities = 120/565 (21%), Positives = 203/565 (35%), Gaps = 70/565 (12%)
Query: 107 LTIDSSTTQYAYNEVGDLLQVTTADGNWVKYSYDDARRLIGVRNRLGESINYTLDPMGNR 166
L + T+++ + G L ++ A N + + D R+ + N G S+ +
Sbjct: 551 LALAGETSRFYHFREGRLTAISDAYNNRLHITRDRQDRIQRLDNGAGRSLLLRYERRHLV 610
Query: 167 TAE----RTKDANGAVVHLQRRV----FDELGRLIRVVGAGDQTQRYGYD----LNDNQS 214
E DA H ++ + +D RLI A +++RY YD + Q
Sbjct: 611 AIEYQSFHPADAVVEAWHTEQMLVFYRYDASQRLIEATNAAGESERYDYDDQHVILQRQL 670
Query: 215 SDTTPRNNKTQQAFDALNRVSKIVDPLQGVTALGYNSDDKVTKVVDPRGVTTLYTYDSLG 274
+ + +++ A V Q T ++ VT V + G +Y +D
Sbjct: 671 AGGASFFWEWEKSGKAARCVRHWASFSQMDTRYVWDDQGSVT-VQNIDGSEEVYVHDDRA 729
Query: 275 NRISSKSPDGGTSTYAYDEANNLIRSTDARGVVTEYAYDALNRLTSKSYPATPALNIKFL 334
+ DGG AYD+ L+ D G VTEY YD + RL + P
Sbjct: 730 RLVRRVELDGGEHLKAYDDNGRLVAEQDPLGAVTEYRYDDVGRLVTLVPP---------- 779
Query: 335 YDQTADGNLGIGHLTGLQDSAGVLTYTYDAKGNLVRQHRSVGVNSGDYYETLNYGYDAAR 394
D+ G L Y +A+G++ G + +Y +DA
Sbjct: 780 QDEPTSYEYRNGFLHACYRGQAAWKYQRNAQGDVTEATDPDG-------QVTHYQHDAQG 832
Query: 395 NLVQIGYPSNINLTFTRNSAAQVTGVKLAIGNKTATLASNISYQPFGPVNSLTWGNGILL 454
L+ I +P N F N Q+ L G++ SY G + +G L
Sbjct: 833 RLLSIRFPDNSRHVFIWNGLGQLLEETLPDGSQ-----RRFSYDALGRQTTRQDEHGALT 887
Query: 455 SRTYDQDYQLTQQQVGNWQT-TYRYDADSNISETATSLWGAVQYEYDALGRLTQEQTN-- 511
+D +L Q + + + Y+A I+ L +YEY L + N
Sbjct: 888 QYQWDAVGRLVQATLPTGASRAFSYNAYGKITAERDELGRVTRYEYADDLHLVSRRINPD 947
Query: 512 SVKKAYSFDATGNRTQRTTTNLTTSDATETQSLTYASDSNRVTSINGSTLPVDAAGNHTQ 571
+ Y +D QR T + ++A E L Y P T
Sbjct: 948 GTQLRYRYD----NAQRLLTEI-ENEAGEHYRLDYT--------------PGGLIRQETG 988
Query: 572 INGRR--FTYDSQGRL---SEVYQANIYKIADYKYNALGQRIIKRAYVMGSQALAGTTTY 626
+GRR ++YD G L +E + I Y+ ++ G+ ++K + Y
Sbjct: 989 FDGRRTAYSYDLNGHLLEKTEFGDDDSQLITGYQRDSAGRLLVK------TLPDGVKVKY 1042
Query: 627 LYDPSGKLIGQTLYDGNGQKTSGQY 651
YD G+L+ ++ DG+ +Y
Sbjct: 1043 RYDRLGRLV--SVDDGHDHPLEFEY 1065