Pairwise Alignments
Query, 913 a.a., YD repeat protein from Pseudomonas syringae pv. syringae B728a
Subject, 1517 a.a., membrane protein from Ralstonia solanacearum GMI1000
Score = 172 bits (435), Expect = 2e-46
Identities = 202/831 (24%), Positives = 321/831 (38%), Gaps = 136/831 (16%)
Query: 17 WLACSAQAGTISRTYTALG-------QVASIDGARTDVNDVTQYAYDAQGNLTTVTNALG 69
WL G ++R LG Q+ + + T +++DAQG LT V G
Sbjct: 593 WLYEHNAEGLVTRETDPLGNSTQREWQLGRLTSETDPLGRRTDFSHDAQGKLTGVREPSG 652
Query: 70 QVYALASFDSYGNPQSITDPNGVMTTLSYTPQGWLASLTI-DSSTTQYAYNEVGDLLQVT 128
V +DS ++ P G L Y Q L + T D + +Y Y E G+LL++
Sbjct: 653 AVTQF-QYDSQRRLAAMALPTGDRVALEYDKQHRLIARTEPDGTVKRYRYGERGELLRMV 711
Query: 129 TADGNWVKYSYDDARRLIGVRNRLGESINYTLDPMGNRTAERTKDAN------------- 175
+ + YDD RL+ R G + D +G + D N
Sbjct: 712 DGERE-TRLDYDDQLRLVVTRLPSGARLGTRFDVLGRLLEDTDPDGNATRYDHASGPHNP 770
Query: 176 -GAVVH-------LQRRVFDELGRLIRVVGAGDQTQRYGYDLNDNQSSDTTPRNNKTQQA 227
G V R V++ G I +T R Y D + + T+
Sbjct: 771 RGNVAQKTLADGTAHRTVYNSEGLPIEQTDPLGRTTRTTYGPFDLVTGTIDAAGHATRFE 830
Query: 228 FDALNRVSKIVDPLQGVTALGYNSDDKVTKVVDPRGVTTLYTYDSLGNRISSKSPDGGTS 287
+D R+++IV+ L Y++ ++ D G TT YT D+ G ++ PDGG
Sbjct: 831 YDHATRLTRIVNALGEAWTYRYDAAGRLAAETDWGGRTTGYTRDAAGRLLTKTLPDGGAW 890
Query: 288 TYAYDEANNLIRSTDARGVVTEYAYDALNRLTSKSYPATPALNI-KFLYDQTADGNLGIG 346
Y YD A+ L+ + DA V Y YDA RLT+ + A ++ +F YD G G
Sbjct: 891 HYRYDLADRLV-AVDAGDVTLTYRYDAAGRLTAAAVHHDAATHVTRFRYD-------GNG 942
Query: 347 HLTGLQDSAGVLTYTYDAKGNLVRQHRSVGVNSGDYYETLNYGYDAARNLVQIGYPSNIN 406
+ +L + YDA+G + + ET YGYDA L Q+G
Sbjct: 943 RVIEEDQHGQLLKHIYDAQGQRT-------LRKTPHRET-RYGYDALGALTQVG-----G 989
Query: 407 LTFTRNSAAQVTGVKLAIGNKTATLASNISYQPFGPVNSLTWGNGILLSRTYDQDYQLTQ 466
L+ TR+ + TG + + R YD +L +
Sbjct: 990 LSITRDGLGRETGRQ---------------------------AGDFIAQRQYDALGRLLR 1022
Query: 467 QQVGNWQTTYRYDADSNISETATSLWGAVQYEYDALGRLTQEQTNSVKKAYSFDATGNRT 526
Q G ++A A Y YDA G+L Q +T++ + Y D G T
Sbjct: 1023 QAAG---PRAAFEAMQTDPVQALQWLTRQSYRYDAAGQLAQVETDTDRFTYQHDPRGQVT 1079
Query: 527 QRTTTNLTTSDATETQSLTYASDSNRVTSINGSTLPVDA-----AGNHTQINGRRFTYDS 581
+S + TY + N + +G P+D G ++ R+ YD+
Sbjct: 1080 S------VSSIRQPAEHYTYNAAQN--IAAHGRQGPIDGRHYLPGGLPERVGHTRYRYDA 1131
Query: 582 QGR-LSEVYQANIYKIADYKYNALGQRIIKRAYVMGSQALAGTTTYLYDPSGKLI----- 635
+GR + + + ++ ++Y G + + + G+ Y YD + +
Sbjct: 1132 RGRTIEKTIEQPGFRPKTWRYEWDGLNRLVKVHTPDK----GSWAYRYDAFNRRVEKVNT 1187
Query: 636 -----------GQTLYDGNGQKTSGQY-----WFWL--DNMPLAQLTANFSTLGEVSSSK 677
G T+ + GQK G W + + PLAQ T ++
Sbjct: 1188 GTGASVRFVWDGYTVAERWGQKRDGSTGTATTWHFEPDSHTPLAQET----------DAQ 1237
Query: 678 LIYLHVDHLNTPRLATDSSQALLWRWNSDAYGVGSPEEDVDGDGKATTIALRFPGQIYDA 737
+ + P ++ +W + +G E+ GD +A +LRF GQ D
Sbjct: 1238 HYAVFCNPTGLPLEIYRATGEKVWASRYNLWGQALSEDTPPGD-EALDTSLRFAGQWADE 1296
Query: 738 QTQLSYNYYRDYNPDTGRYVQSDPIGLGGGLNTYAYVNANPMSFIDPMGLA 788
++ L YN R Y+PD+G Y+ DPI + GG T YV NP+ +DP+GLA
Sbjct: 1297 ESGLHYNLNRYYDPDSGCYLSIDPIAIRGGHRTQGYVQ-NPLWEVDPLGLA 1346
Score = 104 bits (260), Expect = 4e-26
Identities = 153/652 (23%), Positives = 240/652 (36%), Gaps = 93/652 (14%)
Query: 35 GQVASIDGARTDVNDVTQYAYDAQGNLTTVTNALGQVYALASFDSYGNPQSIT--DPNGV 92
G VA ++ + + YD G L + + G ALA SIT + +G
Sbjct: 448 GAVARLERIEDHSGNAIAFDYDEHGRLIALRHTSGYRLALAYPGGAHTVASITLHEASGA 507
Query: 93 MTTL-SYTPQGWLASL--TIDSSTTQYAYNEVGDLLQVTTADGNWVKYSYDDARRLIGVR 149
L Y G + + + T Y Y+ G + D V+Y YD+A R++
Sbjct: 508 THRLVDYAYDGPMLARVSSFQHGTFHYTYDHRGWITGWRDTDQTDVRYRYDEAGRVVETG 567
Query: 150 NRLGESINYTLDPMGNRTAERTKDANGAVVH------LQRRVFDELGRLIRVVGAGDQTQ 203
R G + + G R DA+G ++ L R D L G+ TQ
Sbjct: 568 TREGYHTGHLVYEDGR---TRVLDADGEWLYEHNAEGLVTRETDPL---------GNSTQ 615
Query: 204 RYGYDLNDNQSSDTTPRNNKTQQAFDALNRVSKIVDPLQGVTALGYNSDDKVTKVVDPRG 263
R + L +S+T P +T + DA +++ + +P VT Y+S ++ + P G
Sbjct: 616 R-EWQLG-RLTSETDPLGRRTDFSHDAQGKLTGVREPSGAVTQFQYDSQRRLAAMALPTG 673
Query: 264 VTTLYTYDSLGNRISSKSPDGGTSTYAYDEANNLIRSTDARGVVTEYAYDALNRLTSKSY 323
YD I+ PDG Y Y E L+R D T YD RL
Sbjct: 674 DRVALEYDKQHRLIARTEPDGTVKRYRYGERGELLRMVDGER-ETRLDYDDQLRLVVTRL 732
Query: 324 PATPALNIKF------LYDQTADGN-LGIGHLTGLQDSAGVLTY-----------TYDAK 365
P+ L +F L D DGN H +G + G + Y+++
Sbjct: 733 PSGARLGTRFDVLGRLLEDTDPDGNATRYDHASGPHNPRGNVAQKTLADGTAHRTVYNSE 792
Query: 366 GNLVRQHRSVGVNSGDYY---ETLNYGYDAARNLVQIGYPSNINLTFTRNSAAQV----- 417
G + Q +G + Y + + DAA + + Y LT N+ +
Sbjct: 793 GLPIEQTDPLGRTTRTTYGPFDLVTGTIDAAGHATRFEYDHATRLTRIVNALGEAWTYRY 852
Query: 418 -TGVKLAIGNKTATLASNISYQPFGPVNSLTWGNGILLSRTYDQDYQLTQQQVGNWQTTY 476
+LA + + G + + T +G YD +L G+ TY
Sbjct: 853 DAAGRLAAETDWGGRTTGYTRDAAGRLLTKTLPDGGAWHYRYDLADRLVAVDAGDVTLTY 912
Query: 477 RYDADSNISETAT---SLWGAVQYEYDALGRLTQEQTNSVKKAYSFDATGNRTQRTTTNL 533
RYDA ++ A + ++ YD GR+ +E + + +DA G RT R T +
Sbjct: 913 RYDAAGRLTAAAVHHDAATHVTRFRYDGNGRVIEEDQHGQLLKHIYDAQGQRTLRKTPHR 972
Query: 534 TTSDATETQSLTYASDSNRVTSINGSTLPVDAAGNHTQINGRRFTYDSQGRLSEVYQANI 593
T DA G TQ+ G T D GR + +
Sbjct: 973 ET------------------------RYGYDALGALTQVGGLSITRDGLGRETGRQAGDF 1008
Query: 594 YKIADYKYNALGQRIIKRAYVMGS---------QALAGTT--TYLYDPSGKL 634
IA +Y+ALG+ + + A + QAL T +Y YD +G+L
Sbjct: 1009 --IAQRQYDALGRLLRQAAGPRAAFEAMQTDPVQALQWLTRQSYRYDAAGQL 1058