Pairwise Alignments
Query, 913 a.a., YD repeat protein from Pseudomonas syringae pv. syringae B728a
Subject, 1534 a.a., RHS repeat-associated core domain-containing protein from Lysobacter sp. OAE881
Score = 189 bits (479), Expect = 2e-51
Identities = 207/815 (25%), Positives = 322/815 (39%), Gaps = 117/815 (14%)
Query: 45 TDVNDVTQYAYDAQGNLTTVTNALGQVYALASFDSYGNPQSITDPNGVMTTLSYTPQG-W 103
TD + V YDA GN + + G+++ +D+ GN DP G T Y G W
Sbjct: 579 TDPDVVLALRYDANGNARELVDGEGKLWQY-EYDAQGNLARAIDPLGHKWTYGYDADGNW 637
Query: 104 LASLTIDSSTTQYAYNEVGDLLQVTTADGNWVKYSYDDARRLIGVRNRLGESINYTLDPM 163
L+S + +++ Y++ G L V A YD A R V + G + D
Sbjct: 638 LSSTDPNQRESRFEYDKTGRLKSVADARKATTALEYDSAGRPREVTDPTGAYERLSFDLA 697
Query: 164 GNRTAERTKDANGAVVHLQRRVFDEL-------GRLIRV-VGAGDQTQRYGYDLNDNQSS 215
G + +++A+G V FD L G + R+ D T R GY + + S
Sbjct: 698 GR--FKGSENASGQKVAFGFDAFDRLTMVTDGTGNITRLDYAEPDGTDRGGYLV--TKVS 753
Query: 216 DTTPRNNKTQQAFDALNRVSKIVDPLQGVTALGYNSDDKVTKVVDPRGVTTLYTYDSLGN 275
T + + + +R +VD T Y+ T DP + +YD+LG
Sbjct: 754 YPTWQRLLYYNSRNWASRSVAVVDGTTRSTTSTYDERGLETSQTDPYEKVSGASYDALGR 813
Query: 276 RISSKSPDGGTSTYAYDEANNLIRSTDARGVVTEYAYDALNRLTSKSYPATPALNIKFLY 335
+ + + G YAYD +NL+ TD G YD N+L ++ A ++ Y
Sbjct: 814 LLEATNELGDKVRYAYDRRDNLVSVTDELGHTRRLEYDRRNKLVKETSAA--GEETEYRY 871
Query: 336 DQTADGNLGIGHLTGLQDSAGV-LTYTYDAKGNLVRQHRSVGVNSGDYYETLNYGYDAAR 394
D G L + + GV + +D G L + R G +T + +DA
Sbjct: 872 DDA-------GRLAEVSRANGVRIALMFDPAGYL--KTRKAFRPDGSLEQTHTFDWDAG- 921
Query: 395 NLVQIGYPSNINLTFTRNSAAQVTGVKLAIGNKTATLASNISYQPFGPVNSLTWGNGILL 454
N + N + T T + A ++ + + + +A + +Y G + + + +G++L
Sbjct: 922 NRLSAWATDNASATLTYDDAGRLLSETVTV--RGVAMARHYTYHANGQLKTTSGPDGVVL 979
Query: 455 SRTYDQDYQLTQQQV----------GNWQ----------TTYRYDADSNISET------- 487
+ +YD + + ++ +W T ++ D +++T
Sbjct: 980 AYSYDGNGDFERLEIPGEGSITVSGRHWTAPKSVVLPGGTVQEFELDGLLNQTRLRVRGP 1039
Query: 488 -------ATSLWG-------------AVQYEYDALGRLTQEQTNSVKKAYSF--DATGNR 525
+S++G + YEYDA RL + A F DA NR
Sbjct: 1040 SQATLFDQSSVYGLRDEVIRRTTQSREITYEYDASLRLVEANPAGFGTAEKFVLDAASNR 1099
Query: 526 TQRTTTNLTTSDATETQSLTYASDSNRVTSINGSTLPVDAAGNHT-QINGR--------R 576
TSD + Y ++NR+ + DA+GN +++GR
Sbjct: 1100 ---------TSDQNVENTWQY-DEANRLLERGPFSYEYDASGNLVRRVDGRVQEPRRTTH 1149
Query: 577 FTYDSQGRLSEVYQANIYKIADYKYNALGQRIIKRAYVMGSQAL----AGTTTYLYDPSG 632
+ YD RL EV +A Y Y+ G RI K + + AG YL G
Sbjct: 1150 YAYDGYNRLVEVRNGAAEVLARYDYDPFGYRIRKEVTAAAAGQVPGIQAGVRVYLQAEEG 1209
Query: 633 KLIGQTLYDGNGQKTSGQYWFWLDNMPLAQLTANFSTLGEVSSSKLIYLHVDHLNTPRLA 692
L D NGQ + + WL P L S Y H D PRL
Sbjct: 1210 LL---AELDANGQVV--RSFGWLPERPYGTLPTFMR-----SGGSYYYYHHDPTGMPRLL 1259
Query: 693 TDSSQALLWRWNS-DAYGVGSPEEDVDGDGKATTIALRFPGQIYDAQTQLSYNYYRDYNP 751
TD ++W+ +S A+G P G R PGQ YD +T L YN R Y+P
Sbjct: 1260 TDKDGQIVWQADSVSAFGEARPFA-----GAMIEQPWRLPGQYYDPETGLHYNLQRYYDP 1314
Query: 752 DTGRYVQSDPIGLGGGLNTYAYVNANPMSFIDPMG 786
GRY+ DP+GL GGLN Y Y +A+P F+DP G
Sbjct: 1315 TIGRYISEDPLGLEGGLNHYVYASASPTVFMDPTG 1349
Score = 100 bits (250), Expect = 5e-25
Identities = 131/562 (23%), Positives = 215/562 (38%), Gaps = 67/562 (11%)
Query: 48 NDVTQYAYDAQGNLTTVTNALGQVYALASFDSYGNPQSITDPNGVMTTLSYTPQGWLASL 107
N+VT+ + +T TN G +++ + +P+ I D GV T + Y +G L L
Sbjct: 483 NNVTRIDRNNFDEVTRETNPDGSSVSISYEAASLDPKEIVDAAGVKTRMEYDGKGNLTRL 542
Query: 108 TI-----DSSTTQYAYNEVGDLLQVTTADGNWVKYSYDDARRLIGVRNRLGESINYTLDP 162
+ D T+Y N G+ +V G D ++ +R D
Sbjct: 543 IVAADTPDEQITEYEVNARGEP-EVVRRKGGSRPDGGTDPDVVLALR----------YDA 591
Query: 163 MGNRTAERTKDANGAVVHLQRRVFDELGRLIRVVGAGDQTQRYGYDLNDNQSSDTTPRNN 222
GN A D G + + +D G L R + YGYD + N S T P
Sbjct: 592 NGN--ARELVDGEGKLWQYE---YDAQGNLARAIDPLGHKWTYGYDADGNWLSSTDPNQR 646
Query: 223 KTQQAFDALNRVSKIVDPLQGVTALGYNSDDKVTKVVDPRGVTTLYTYDSLGNRISSKSP 282
+++ +D R+ + D + TAL Y+S + +V DP G ++D G S++
Sbjct: 647 ESRFEYDKTGRLKSVADARKATTALEYDSAGRPREVTDPTGAYERLSFDLAGRFKGSENA 706
Query: 283 DGGTSTYAYDEANNLIRSTDARGVVTEYAY---DALNR----LTSKSYPATPALNIKFLY 335
G + +D + L TD G +T Y D +R +T SYP L Y
Sbjct: 707 SGQKVAFGFDAFDRLTMVTDGTGNITRLDYAEPDGTDRGGYLVTKVSYPTWQRL---LYY 763
Query: 336 DQTADGNLGIGHLTGLQDSAGVLTYTYDAKGNLVRQHRSVGVNSGDYYETLNYGYDAARN 395
+ + + + G S T TYD +G Q SG Y+ L +A
Sbjct: 764 NSRNWASRSVAVVDGTTRST---TSTYDERGLETSQTDPYEKVSGASYDALGRLLEATNE 820
Query: 396 L---VQIGYPSNINLTFTRNSAAQVTGV------KLAIGNKTATLASNISYQPFGPVNSL 446
L V+ Y NL + + KL A + Y G + +
Sbjct: 821 LGDKVRYAYDRRDNLVSVTDELGHTRRLEYDRRNKLVKETSAAGEETEYRYDDAGRLAEV 880
Query: 447 TWGNGILLSRTYDQDYQLTQQQV----GNWQTTYRY--DADSNISETATSLWGAVQYEYD 500
+ NG+ ++ +D L ++ G+ + T+ + DA + +S AT A YD
Sbjct: 881 SRANGVRIALMFDPAGYLKTRKAFRPDGSLEQTHTFDWDAGNRLSAWATDNASAT-LTYD 939
Query: 501 ALGRLTQEQTN----SVKKAYSFDATGNRTQRTTTNLTTSDATETQSLTYASDSNRVTSI 556
GRL E ++ + Y++ A G L T+ + L Y+ D N
Sbjct: 940 DAGRLLSETVTVRGVAMARHYTYHANG--------QLKTTSGPDGVVLAYSYDGNG---- 987
Query: 557 NGSTLPVDAAGNHTQINGRRFT 578
+ L + G+ T ++GR +T
Sbjct: 988 DFERLEIPGEGSIT-VSGRHWT 1008
Score = 88.2 bits (217), Expect = 4e-21
Identities = 166/664 (25%), Positives = 249/664 (37%), Gaps = 144/664 (21%)
Query: 34 LGQVASIDGARTDVNDVTQYAYDAQGNLTTVTNAL-----GQVYALASFDSYGNPQSITD 88
+G++ + DG TD + Y YD ++T G+ FD G P S D
Sbjct: 406 VGRIKAPDGGVTDFD----YGYDKLKKEFSITARYPQTDSGRRVETTYFDQEGRP-SRRD 460
Query: 89 PNGVMTTLSYTPQGWLASLTID--SSTTQYAYNEVGDLLQVTTADGNWVKYSYDDARRLI 146
NG + L T W + ID ++ T+ N ++ + T DG+ V SY+ A
Sbjct: 461 VNGKV--LMSTQGSWSSLSYIDERNNVTRIDRNNFDEVTRETNPDGSSVSISYEAA---- 514
Query: 147 GVRNRLGESINYTLDPMGNRTAERTKDANGAVVHLQRRVFDELGRLIRVVGAGD--QTQR 204
+LDP + DA G ++ +D G L R++ A D Q
Sbjct: 515 ------------SLDP------KEIVDAAGVKTRME---YDGKGNLTRLIVAADTPDEQI 553
Query: 205 YGYDLNDNQSSDTTPRNNKTQQAFDALNRVSKIVDPLQGVTALGYNSDDKVTKVVDPRGV 264
Y++N + R + R DP V AL Y+++ ++VD G
Sbjct: 554 TEYEVNARGEPEVVRRKGGS--------RPDGGTDP-DVVLALRYDANGNARELVDGEGK 604
Query: 265 TTLYTYDSLGNRISSKSPDGGTSTYAYDEANNLIRSTDARGVVTEYAYDALNRLTS--KS 322
Y YD+ GN + P G TY YD N + STD + + YD RL S +
Sbjct: 605 LWQYEYDAQGNLARAIDPLGHKWTYGYDADGNWLSSTDPNQRESRFEYDKTGRLKSVADA 664
Query: 323 YPATPALNIKFLYDQTADGNLGIGHLTGLQDSAGVLT-YTYDAKGNLVRQHRSVGVNSGD 381
AT AL YD G + D G ++D G + G
Sbjct: 665 RKATTALE----YDSA-------GRPREVTDPTGAYERLSFDLAGRFKGSENASG----- 708
Query: 382 YYETLNYGYDAARNLVQIGYPSNINLTFTRNSAAQVTGVKLAIGNKTATLASNISYQPFG 441
+ + +G+DA L + + TR A+ G G T S ++Q
Sbjct: 709 --QKVAFGFDAFDRLTMVTDGTG---NITRLDYAEPDGTDR--GGYLVTKVSYPTWQRLL 761
Query: 442 PVNSLTWGNGILLSRTYDQDYQLTQQQVGNWQTTYRYDADSNISETATSLWGAVQ-YEYD 500
NS W SR+ T+ TT YD + + + T + V YD
Sbjct: 762 YYNSRNWA-----SRSVAVVDGTTRS------TTSTYD-ERGLETSQTDPYEKVSGASYD 809
Query: 501 ALGRLTQEQTNSV--KKAYSFDATGNRTQRTTTNLTTSDATETQSLTYASDSNRVTSING 558
ALGRL E TN + K Y++D N T + T+ L Y + V +
Sbjct: 810 ALGRLL-EATNELGDKVRYAYDRRDNLVS------VTDELGHTRRLEYDRRNKLVKETS- 861
Query: 559 STLPVDAAGNHTQINGRRFTYDSQGRLSEVYQANIYKIADYKYNALGQRIIKRAY----- 613
AAG T+ + YD GRL+EV +AN +IA ++ G ++A+
Sbjct: 862 ------AAGEETE-----YRYDDAGRLAEVSRANGVRIA-LMFDPAGYLKTRKAFRPDGS 909
Query: 614 ---------VMGSQALAGTT-----TYLYDPSGKLIGQTL------------YDGNGQ-- 645
G++ A T T YD +G+L+ +T+ Y NGQ
Sbjct: 910 LEQTHTFDWDAGNRLSAWATDNASATLTYDDAGRLLSETVTVRGVAMARHYTYHANGQLK 969
Query: 646 KTSG 649
TSG
Sbjct: 970 TTSG 973
Score = 76.6 bits (187), Expect = 1e-17
Identities = 104/411 (25%), Positives = 160/411 (38%), Gaps = 72/411 (17%)
Query: 30 TYTALGQVASIDGARTDVNDVTQYAYDAQGNLTTVTNALGQVYALASFDSYGNPQSITDP 89
+Y ALG++ A ++ D +YAYD + NL +VT+ LG L +D T
Sbjct: 807 SYDALGRLLE---ATNELGDKVRYAYDRRDNLVSVTDELGHTRRL-EYDRRNKLVKETSA 862
Query: 90 NGVMTTLSYTPQGWLASLTIDSSTTQYAYNEVGDLLQVTTADGNWVKYSYDDA-----RR 144
G T+Y Y++ G L +V+ A+G + +D A R+
Sbjct: 863 AG--------------------EETEYRYDDAGRLAEVSRANGVRIALMFDPAGYLKTRK 902
Query: 145 LIGVRNRLGESINYTLDPMGNRTAERTKDANGAVVHLQRRVFDELGRLIR---VVGAGDQ 201
L ++ + D GNR + D A + +D+ GRL+ V
Sbjct: 903 AFRPDGSLEQTHTFDWD-AGNRLSAWATDNASATL-----TYDDAGRLLSETVTVRGVAM 956
Query: 202 TQRYGYDLNDNQSSDTTPRNNKTQQAFDALNRVSKIVDPLQGVTALGYNSDDKVTKVVDP 261
+ Y Y N + + P ++D ++ P +G + VV P
Sbjct: 957 ARHYTYHANGQLKTTSGPDGVVLAYSYDGNGDFERLEIPGEGSITVSGRHWTAPKSVVLP 1016
Query: 262 RGVTTLYTYDSLGN--RISSKSPDGGT---STYAYDEANNLIRSTDARGVVTEYAYDALN 316
G + D L N R+ + P T + Y + +IR T +T Y YDA
Sbjct: 1017 GGTVQEFELDGLLNQTRLRVRGPSQATLFDQSSVYGLRDEVIRRTTQSREIT-YEYDASL 1075
Query: 317 RLTSKSYPATPALNIKFLYD----QTADGNLGIGHLTGLQDSA------GVLTYTYDAKG 366
RL ++ PA KF+ D +T+D N+ T D A G +Y YDA G
Sbjct: 1076 RLV-EANPAGFGTAEKFVLDAASNRTSDQNV---ENTWQYDEANRLLERGPFSYEYDASG 1131
Query: 367 NLVRQHRSVGVNSGDYYETLNYGYDAARNLVQIGYPSNINLTFTRNSAAQV 417
NLVR+ V + T +Y YD LV++ RN AA+V
Sbjct: 1132 NLVRR---VDGRVQEPRRTTHYAYDGYNRLVEV-----------RNGAAEV 1168
Score = 51.2 bits (121), Expect = 5e-10
Identities = 127/570 (22%), Positives = 190/570 (33%), Gaps = 144/570 (25%)
Query: 73 ALASFDSYGNPQSITDPNGVMTTLSYTPQGWLASLTIDSSTTQYAYNEVG-------DLL 125
A +D++G S D N V + Y G + + D+ T + G ++
Sbjct: 242 AWIEYDNFGRITSYGDRNDVRVWMQYGSHGQVERVLDDNGRTVFTLLYTGGNADFISEVR 301
Query: 126 QVTTADGNW--VKYSYDDARRLIGVRNRLGESINYTLDPMGNRTAERTKDANGAVVHLQR 183
T DG+ VKY YD RL V +D GN T+
Sbjct: 302 DHTPFDGSIRRVKYQYDGDGRLRTV-----------IDARGNPTS--------------- 335
Query: 184 RVFDELGRLIRVVGAGDQTQRYGYDLNDNQSSDTTPRNNKTQQAFDALNRVSKIVDPLQG 243
FD G L V A D YG T R T A
Sbjct: 336 --FD-YGSLDSV--AYDYDGGYGAPNTGGSGEPTNARATTTSAA---------------- 374
Query: 244 VTALGYNSDDKVTKVVDPRGVTTLYTYDSLGNRISSKSPDGGTSTYAYDEANNLIRSTDA 303
T ++ KVTKV D G T +Y K+PDGG + +
Sbjct: 375 -TGFVVDTRRKVTKVTDAEGRVTEISYGVTARVGRIKAPDGGVTDF-------------- 419
Query: 304 RGVVTEYAYDALNRLTSKSYPATPALNIKFLYDQTADGNLGIGHLTGLQDSAGVLTYTYD 363
+Y YD L + +I Y QT G V T +D
Sbjct: 420 -----DYGYDKLKK----------EFSITARYPQTDSGR-------------RVETTYFD 451
Query: 364 AKGNLVRQ--HRSVGVNSGDYYETLNYGYDAARNLVQIGYPSNINLTFTRNSAAQVTGVK 421
+G R+ + V +++ + +L+Y D N+ +I + +T N G
Sbjct: 452 QEGRPSRRDVNGKVLMSTQGSWSSLSY-IDERNNVTRIDRNNFDEVTRETNP----DGSS 506
Query: 422 LAIGNKTATLASNISYQPFGPVNSLTW-GNG---ILLSRTYDQDYQLTQQQVG------- 470
++I + A+L G + + G G L+ D Q+T+ +V
Sbjct: 507 VSISYEAASLDPKEIVDAAGVKTRMEYDGKGNLTRLIVAADTPDEQITEYEVNARGEPEV 566
Query: 471 ---------------NWQTTYRYDADSNISETATSLWGAVQYEYDALGRLTQE-QTNSVK 514
+ RYDA+ N E QYEYDA G L + K
Sbjct: 567 VRRKGGSRPDGGTDPDVVLALRYDANGNARELVDGEGKLWQYEYDAQGNLARAIDPLGHK 626
Query: 515 KAYSFDATGNRTQRTTTNLTTS--DATETQSLTYASDSNRVTSINGSTLPVDAAGNHTQI 572
Y +DA GN T N S + +T L +D+ + T + L D+AG ++
Sbjct: 627 WTYGYDADGNWLSSTDPNQRESRFEYDKTGRLKSVADARKAT----TALEYDSAGRPREV 682
Query: 573 NG-----RRFTYDSQGRLSEVYQANIYKIA 597
R ++D GR A+ K+A
Sbjct: 683 TDPTGAYERLSFDLAGRFKGSENASGQKVA 712
Score = 35.4 bits (80), Expect = 3e-05
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 23 QAGTISRTYTALGQ-VASIDGARTDVNDVTQYAYDAQGNLTTVTNALGQVYALASFDSYG 81
+ G S Y A G V +DG + T YAYD L V N +V A +D +G
Sbjct: 1119 ERGPFSYEYDASGNLVRRVDGRVQEPRRTTHYAYDGYNRLVEVRNGAAEVLARYDYDPFG 1178