Pairwise Alignments

Query, 386 a.a., Secretion protein HlyD from Pseudomonas syringae pv. syringae B728a

Subject, 385 a.a., multidrug efflux RND transporter periplasmic adaptor subunit AcrE from Escherichia coli Nissle 1917

 Score =  296 bits (759), Expect = 5e-85
 Identities = 164/376 (43%), Positives = 241/376 (64%), Gaps = 8/376 (2%)

Query: 1   MSSFSDWRVMPAVALLAALGLSGCEQKQQQDHAASTAPKEVEAITVNTESFTVVDELPGR 60
           M+  + + ++P+  L++A  ++GC  K ++   A     +V    V T    V  ELPGR
Sbjct: 1   MTKHARFFLLPSFILISAALIAGCNDKGEEK--AHVGEPQVTVHIVKTAPLEVKTELPGR 58

Query: 61  IEPVRVAQVRARVAGIVLSRNFEEGADVKAGAVLFQIDPAPFKAALSKAQGDLARTQATL 120
               R+A+VR +V+GIVL+RNF EG+DV+AG  L+QIDPA ++A+   A+G+LA+++A  
Sbjct: 59  TNAYRIAEVRPQVSGIVLNRNFTEGSDVQAGQSLYQIDPATYQASYDSAKGELAKSEAAA 118

Query: 121 FETQATVKRYESLVEIEAVSRQTFDTARSALQNAVAAKRSAEADVETARLNLGYATVKAP 180
                TVKRY  LV  + +S+Q +D A +  + A AA  +A+A VE+AR+NL Y  V AP
Sbjct: 119 AIAHLTVKRYVPLVGTKYISQQEYDQAIADARQADAAVIAAKATVESARINLAYTKVTAP 178

Query: 181 ISGRIGRAMVTEGALVGQGETTLLATIQQLDPVYADFTQPAAEALQMRAAIQEGRLPKGG 240
           ISGRIG++ VTEGALV  G+TT LAT+QQLDP+Y D TQ + + ++++ ++++G L K  
Sbjct: 179 ISGRIGKSTVTEGALVTNGQTTELATVQQLDPIYVDVTQSSNDFMRLKQSVEQGNLHK-- 236

Query: 241 EDALS----LSVDGTDYTSTGTLLFTDVAVDRTTGQVSLRARFANPKGVLLPGMYVRVRT 296
           E+A S    +  +G  Y   GTL F+DV VD +TG ++LRA F NP+  LLPGM+VR R 
Sbjct: 237 ENATSNVELVMENGQTYPLKGTLQFSDVTVDESTGSITLRAVFPNPQHTLLPGMFVRARI 296

Query: 297 PQRVDSNAILVPQRAVQRSGDGAARVLVIAQDGTVEARPVKTGAMQDSRWQITEGLKAGE 356
            + V  +AIL+PQ+ V R+  G A VL++     VEARPV        +W I+EGLK+G+
Sbjct: 297 DEGVQPDAILIPQQGVSRTPRGDATVLIVNNKSQVEARPVVASQAIGDKWLISEGLKSGD 356

Query: 357 QVIVGNMTGLSAGDKV 372
           QVIV  +     G++V
Sbjct: 357 QVIVSGLQKARPGEQV 372