Pairwise Alignments

Query, 656 a.a., DNA topoisomerase III from Pseudomonas syringae pv. syringae B728a

Subject, 648 a.a., DNA topoisomerase III (EC 5.99.1.2) from Pseudomonas fluorescens FW300-N2E2

 Score = 1085 bits (2807), Expect = 0.0
 Identities = 540/655 (82%), Positives = 585/655 (89%), Gaps = 9/655 (1%)

Query: 1   MRLFLCEKPSQAKDIAAALGATRRGDGCWVGANATVTWCIGHLLETAPPDAYDARYKRWV 60
           M+L+LCEKPSQAKDIAA LGATRRGDGCW+G   TVTWCIGHLLETAPPDAYDARYKRWV
Sbjct: 1   MQLYLCEKPSQAKDIAAVLGATRRGDGCWLGPGITVTWCIGHLLETAPPDAYDARYKRWV 60

Query: 61  LEDLPIVPEKWKMLVKPRTASQFKAVKRLLGEATELVIATDADREGEMIARELIEHCRYR 120
           L DLPIVP +WKM VKP+TASQ+KAVKRLLGEA ELVIATDADREGEMIAREL+EHCRYR
Sbjct: 61  LTDLPIVPAQWKMTVKPKTASQYKAVKRLLGEAKELVIATDADREGEMIARELVEHCRYR 120

Query: 121 GPIQRLWLSALDDASIRKALAALKPGADTFSLYHSALGRSRADWLIGMNMSRLFTLLGRQ 180
           GPI+RLWLSALD+ASIRKALAALKPGA+TF+LYHSALGRSRADWLIGMNMSRLFTLLGRQ
Sbjct: 121 GPIRRLWLSALDEASIRKALAALKPGAETFNLYHSALGRSRADWLIGMNMSRLFTLLGRQ 180

Query: 181 SGYQGVLPVGRVQTPTLRLVVDRDRSIANFVPAPYWAIDVRLLHDNQAFIAQWRAPSDAC 240
           SGYQGVLPVGRVQTPTLRLVVDRDRSIA+FVP  YWAIDV+L H+  AF AQWRA  DAC
Sbjct: 181 SGYQGVLPVGRVQTPTLRLVVDRDRSIADFVPVAYWAIDVQLSHEGMAFTAQWRADPDAC 240

Query: 241 DDQDRCLNQALAQQAAQAMRAAASARLVKLRTERIREAAPLPFDLGTLQEICSKKLGLGA 300
           DDQ+RCLNQALA+ AAQAMR AA+AR +K+RTER+REAAPLPFDLGTLQE+CSKKLGLGA
Sbjct: 241 DDQERCLNQALARDAAQAMRNAATARTLKVRTERLREAAPLPFDLGTLQEVCSKKLGLGA 300

Query: 301 QETLDIAQSLYETHKVITYPRSDCGYLPNSQHGEAAGIIAALCKADPALANLSPHLDPQR 360
           QETLDIAQSLYET+K+ITYPRSDCG+LP SQH EA  I+AAL +ADP+LA L  HL PQR
Sbjct: 301 QETLDIAQSLYETYKLITYPRSDCGFLPLSQHSEAPAILAALAQADPSLAPLREHLQPQR 360

Query: 361 RSRAWNDSKVTAHHGIIPTAAVRGVERLSGKPRAVYTLIRARYLAQFLPNHEYDRTQADF 420
           +SRAWND+KV+AHHGIIPTAA + +++L+GK RAVYTLIRARYLAQFLPNHEYDRTQADF
Sbjct: 361 KSRAWNDAKVSAHHGIIPTAAAKNLDKLAGKQRAVYTLIRARYLAQFLPNHEYDRTQADF 420

Query: 421 DCAGHALRAVGKQIVEPGWKRAMPEALAPAKGREAPAPQPLPALFQGCECAVAEVILKDL 480
           DCAG ALRAVGKQIVEPGWKRA+PEALAPAKGREAPAPQ LPAL +G +C V EV  KDL
Sbjct: 421 DCAGQALRAVGKQIVEPGWKRALPEALAPAKGREAPAPQTLPALAEGRDCTVDEVKPKDL 480

Query: 481 WTQPPKPFTEGDLIKAMKNVAKLVEDPLLKQKLKDTTGIGTEATRAGIIQGLLDRGYLTK 540
           WTQPPKPFTEGDLIKAMKNVAKLVEDPLLKQKLKDTTGIGTEATRA IIQGLLDRGYL K
Sbjct: 481 WTQPPKPFTEGDLIKAMKNVAKLVEDPLLKQKLKDTTGIGTEATRASIIQGLLDRGYLVK 540

Query: 541 QGKSLCAAPAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMSLEEFVAKQAAWMSKQV 600
            GK+L A PAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMSLEEFV +QAAWMSK V
Sbjct: 541 NGKALSATPAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMSLEEFVTRQAAWMSKHV 600

Query: 601 SRCVGMRMSISGPASPAG-VKPPWKKKRKTTTRVAKTATTDTAAKKPRRAVRPAA 654
           +RC GM ++ISGPASPAG    PWK KRK   R         AA  PR+A +  A
Sbjct: 601 ARCQGMSLTISGPASPAGRGATPWKNKRKPAKR--------KAAGAPRKASKAKA 647