Pairwise Alignments

Query, 656 a.a., DNA topoisomerase III from Pseudomonas syringae pv. syringae B728a

Subject, 516 a.a., DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster from Pseudomonas fluorescens FW300-N2E2

 Score =  577 bits (1486), Expect = e-169
 Identities = 289/460 (62%), Positives = 341/460 (74%), Gaps = 1/460 (0%)

Query: 1   MRLFLCEKPSQAKDIAAALGATRRGDGCWVGANATVTWCIGHLLETAPPDAYDARYKRWV 60
           MRLFLCEKPSQ KDIA  LGA +RG GC+ G   +VTWCIGHL+E APP+ YD R+K+W 
Sbjct: 24  MRLFLCEKPSQGKDIARVLGARQRGSGCFKGVGISVTWCIGHLVEAAPPETYDERFKQWS 83

Query: 61  LEDLPIVPEKWKMLVKPRTASQFKAVKRLLGEATELVIATDADREGEMIARELIEHCRYR 120
           L+ LPI+P  W++ VK  TA+Q+K VK+LL + +ELVIATDADREGEMIARE++E C+YR
Sbjct: 84  LDHLPILPISWRVRVKANTAAQYKIVKQLLAQTSELVIATDADREGEMIAREVLELCQYR 143

Query: 121 GPIQRLWLSALDDASIRKALAALKPGADTFSLYHSALGRSRADWLIGMNMSRLFTLLGRQ 180
           G IQRLWLSAL+DASIRKAL+ L+   +T SLYHSAL RSRADWLIGMNMSRLFTLLGRQ
Sbjct: 144 GSIQRLWLSALNDASIRKALSQLRQAEETQSLYHSALARSRADWLIGMNMSRLFTLLGRQ 203

Query: 181 SGYQGVLPVGRVQTPTLRLVVDRDRSIANFVPAPYWAIDVRLLHDNQAFIAQWRAPSDAC 240
           +G  GVL VGRVQTPTLRLVVDRDR I  FVP PYW I V+L    QAF AQW AP  A 
Sbjct: 204 AGLNGVLSVGRVQTPTLRLVVDRDREIERFVPRPYWVIQVKLEVLGQAFTAQWAAPDSAT 263

Query: 241 DDQDRCLNQALAQQAAQAMRAAASARLVKLRTERIREAAPLPFDLGTLQEICSKKLGLGA 300
           D+  RC+ QA+A QA Q+ +A   A+++++ T+R REA PLPFDL TLQE+CS++LG G 
Sbjct: 264 DEAGRCIRQAIALQAQQSFKATGVAQVLEVETQRTREAPPLPFDLNTLQEVCSRRLGYGV 323

Query: 301 QETLDIAQSLYETHKVITYPRSDCGYLPNSQHGEAAGIIAALCKADPALANLSPHLDPQR 360
           QETLDIAQSLYETHK  TYPR+D GYLP S   EA  + AAL K+DP +  L   +D   
Sbjct: 324 QETLDIAQSLYETHKATTYPRTDSGYLPESMLLEAEAVFAALIKSDPGVGPLVQSVDFTL 383

Query: 361 RSRAWNDSKVTAHHGIIPTAAVRGVERLSGKPRAVYTLIRARYLAQFLPNHEYDRTQADF 420
           RSRAWNDS+V+AHHGIIPT        LS +  AVY LIRARYLAQFLP HEYDRT    
Sbjct: 384 RSRAWNDSQVSAHHGIIPTLEPFDRLALSERECAVYELIRARYLAQFLPPHEYDRTAVQL 443

Query: 421 DCAGHALRAVGKQIVEPGWKRAMPEALAPAKGREAPAPQP 460
            C  H L+A GK +VE GW R +     P + R + A QP
Sbjct: 444 TCGNHVLKAHGKHVVESGWHRVLGSECPPQR-RRSVATQP 482