Pairwise Alignments

Query, 656 a.a., DNA topoisomerase III from Pseudomonas syringae pv. syringae B728a

Subject, 889 a.a., DNA topoisomerase III from Burkholderia phytofirmans PsJN

 Score =  305 bits (782), Expect = 4e-87
 Identities = 194/613 (31%), Positives = 309/613 (50%), Gaps = 23/613 (3%)

Query: 3   LFLCEKPSQAKDIAAALGATRRGDGCWVGANATVTWCIGHLLETAPPDAYDARYKRWVLE 62
           L + EKPS A DIA ALG   + D  +      ++  +GHLLE A P+ Y+ +  +W   
Sbjct: 5   LIIAEKPSVANDIARALGGFTKHDEYYESDEYVLSSAVGHLLEIAAPEDYEVKRGKWSFA 64

Query: 63  DLPIVPEKWKMLVKPRTASQFKAVKRLLG--EATELVIATDADREGEMIARELIEHCRYR 120
           +LP++P  + +    ++ S+ K + +LL   +   L+ A DA REGE+I R + +H + +
Sbjct: 65  NLPVIPPHFDLNPIAKSESRLKVLTKLLKRKDVDRLINACDAGREGELIFRLIAQHAKAK 124

Query: 121 GPIQRLWLSALDDASIRKALAALKPGADTFSLYHSALGRSRADWLIGMNMSRLFTLLGRQ 180
            P+QRLWL ++   SIR   A L+   +   L  +A  RS ADWL+G+N +R  T    +
Sbjct: 125 QPVQRLWLQSMTAGSIRDGFARLRSDEEMQPLADAARCRSEADWLVGINGTRAMTAFNSK 184

Query: 181 SGYQGVLPVGRVQTPTLRLVVDRDRSIANFVPAPYWAIDVRLLHDNQAFIAQWRAPSDAC 240
            G   +  VGRVQTPTL +VV+R+  I  FVP  YW +    +     +  +W  P    
Sbjct: 185 GGGFFLTTVGRVQTPTLSIVVEREEKIRRFVPRDYWEVKAEFVCSAGFYEGRWFDPKFKR 244

Query: 241 D--DQDRCLNQALAQQAAQAMRAAASARL--VKLRTERIREAAPLPFDLGTLQEICSKKL 296
           D  D ++  ++  A  AA+ + AA   ++  V   ++   + +P  FDL +LQ   + + 
Sbjct: 245 DEFDPEKRDSRLWALPAAETIVAACRGQIGTVTEESKPSTQLSPALFDLTSLQREANGRF 304

Query: 297 GLGAQETLDIAQSLYETHKVITYPRSDCGYLPNSQHGEAAGIIAALCKADPALANLSPHL 356
           G  A+ TL +AQ+LYE HKV+TYPR+D   LP          +  L +++  L      L
Sbjct: 305 GFSAKNTLGLAQALYEKHKVLTYPRTDARALPEDYMDTVKETLGMLKESNNYLPFAKQVL 364

Query: 357 DP---QRRSRAWNDSKVTAHHGIIPTAAVRGVERLSGKPRAVYTLIRARYLAQFLPNHEY 413
           D    +   R +++SK++ H  IIPT  ++  + LS   + +Y L+  R+LA F P  EY
Sbjct: 365 DKGWVKPNKRIFDNSKISDHFAIIPT--LQAPKNLSEPEQKLYDLVVKRFLAVFFPAAEY 422

Query: 414 DRTQADFDCAGHALRAVGKQIVEPGWKRAMPEALAPAKGREAPAPQPLPALFQGCECAVA 473
             T    +  GH  +  GK +VEPGW +     ++       P  +         +    
Sbjct: 423 KVTTRITEVVGHHFKTEGKVLVEPGWLQVYGREISGEDANLVPVQKDE-------KVKTD 475

Query: 474 EVILKDLWTQPPKPFTEGDLIKAMKNVAKLVEDPLLKQKLKDTTGIGTEATRAGIIQGLL 533
           ++  + L T+PP  + E  L+ AM+   KLVED  L++ +    G+GT ATRA II+GLL
Sbjct: 476 KIAAQQLVTKPPARYNEATLLSAMEGAGKLVEDDELREAMA-AKGLGTPATRAAIIEGLL 534

Query: 534 DRGYLTKQGKSLCAAPAAFSLIDAV----PRAIADPGTTAIWEQALDMVQSGEMSLEEFV 589
              YL ++G+ L     AF L+  +     + +  P  T  WE  L  ++ G +  + F+
Sbjct: 535 GEKYLIREGRDLIPTAKAFQLMTLLRGLGVKELTAPELTGEWEYKLSQMERGNLPRDAFM 594

Query: 590 AKQAAWMSKQVSR 602
            + A      V R
Sbjct: 595 QEIARMTQTIVKR 607