Pairwise Alignments

Query, 393 a.a., amino acid/amide ABC transporter substrate-binding protein, HAAT family from Pseudomonas syringae pv. syringae B728a

Subject, 421 a.a., urea ABC transporter substrate-binding protein from Pseudomonas sp. BP01

 Score =  313 bits (801), Expect = 8e-90
 Identities = 176/403 (43%), Positives = 246/403 (61%), Gaps = 18/403 (4%)

Query: 5   KRRLIKHALLLGAISLLPFALIGQAQADEAVKVGIIHSLTGTMAISEASVVDAEKLAIEE 64
           KRR +  A  L A S+    L    QA E +KVGI+HSL+GTMAISE S+ D   + I++
Sbjct: 2   KRRSLIKAFTLSA-SIAAMGLSWSIQAAETIKVGILHSLSGTMAISETSLKDMALMTIDQ 60

Query: 65  INASGGVMGKTIEPIVEDGASDWPTFAEKARKLLENDHVAVTFGAFTSASRKAVLPVFER 124
           INA GGV GK +EP+V D AS+WP FAEK+R+LL  D VAV FG +TS SRK+VLPVFE 
Sbjct: 61  INAKGGVNGKLLEPVVVDPASNWPLFAEKSRQLLTQDKVAVVFGCWTSVSRKSVLPVFEE 120

Query: 125 NKGLLYYPTFYEGLEKSPAIIYTGAEASQQTLAAVTWLMANKG---KSVYLVGSDYIWPR 181
             GLL+YP  YEG E SP + YTGA  +QQ + AV +LM+  G   K  +L+G+DY++PR
Sbjct: 121 LNGLLFYPVQYEGEEMSPNVFYTGAAPNQQAIPAVEYLMSEDGGSAKRFFLLGTDYVYPR 180

Query: 182 TTNKLARASVTKQG--GSIVGEDYLPLGAIEFSSVINKIK---AAKPDIVLSTIVGGSNV 236
           TTNK+ RA +  +G     + E Y P G  ++ +++  IK   A     V+ST+ G SNV
Sbjct: 181 TTNKILRAFLHSKGVADKDIEEVYTPFGHADYQTIVANIKKFSAGGKTAVISTVNGDSNV 240

Query: 237 AFYKQLKAAGIDSSNQTLMGLAITEEEVTGIGAENLVGFLTCMSYFQSLKNPVNEKFVQA 296
            FYK+L   G+ +++  ++  ++ EEE+ GI  + LVG L   +YF+S+ NPVN+KFV  
Sbjct: 241 PFYKELANQGLKATDVPVVAFSVGEEELRGIDTKPLVGHLAAWNYFESVDNPVNQKFVAD 300

Query: 297 FKTRY-------GQQRVVGDPMAAAYTAVYLWKKAVEKAGSFEVPKVIAASSEMTLDAPE 349
           +K            + V  DPM A Y  +++W +A EKA S +V KV  A +  +  AP 
Sbjct: 301 WKAYAKAKGLPGADKAVTNDPMEATYVGIHMWAQAAEKAKSTDVDKVREALAGQSFKAPS 360

Query: 350 G-EIKVHKDNHHLWKRARIGTLNAQGQVDVIYES-APIEPNPF 390
           G  + + K NHHL K   IG +   GQ  V++E+  P+   P+
Sbjct: 361 GFTLTMDKTNHHLHKPVMIGEIQDDGQFSVVWETEQPLRAQPW 403