Pairwise Alignments

Query, 338 a.a., transcriptional regulator, LacI family from Pseudomonas syringae pv. syringae B728a

Subject, 327 a.a., ribose operon transcriptional repressor RbsR from Pantoea sp. MT58

 Score =  244 bits (623), Expect = 2e-69
 Identities = 134/327 (40%), Positives = 203/327 (62%), Gaps = 3/327 (0%)

Query: 4   IKDVAALAGISYTTVSHVLNNTRPVSEPVRLKVEAAIAQLDYVPSAVARSLKAKTTSTIG 63
           +KDVA LAG+S +TVSHV+NN R VS+ VR KVE AI  L+Y PSA+ARSLK   T TIG
Sbjct: 1   MKDVARLAGVSTSTVSHVINNNRFVSDGVREKVEQAIRHLNYAPSALARSLKINQTHTIG 60

Query: 64  LLIPNGMNPYFAELARGIEDYCERNGFCVILCNSDDNPEKQRGYLRVLLEKRVDGLIVSS 123
           +L+    NP++AE+ RG+E+ C + G+ +ILCN+  + E+    L  L++KRVDGL++  
Sbjct: 61  MLLTTSSNPFYAEVVRGVEESCYQRGYSLILCNTAGDEERMNRSLETLMQKRVDGLLMMC 120

Query: 124 VGGDAGIAGGLAEVRT-PLVIVDRELDGIDADMVRIDHEQGAYLATRHLLDLGHRAIACI 182
                  A  L    + P V++D        D+++ +   G  LAT+HL+D G+  IACI
Sbjct: 121 TESHLPSADILNRYPSIPTVMMDWAPFEGRGDIIQDNALLGGELATQHLIDCGYTRIACI 180

Query: 183 GGPFHSTVAEMRLAGYRRALQQASVPVRAEWALHSEFTSSAGHEAACQLLAAH-PPTAIF 241
            GP   T A MRL GYR A+ ++ + +   + ++ +F    G+    +LLA   PP A+F
Sbjct: 181 AGPQDKTPARMRLEGYRNAMTKSGLEILPGYVVNGDFEFQGGYNGMVELLALETPPEAVF 240

Query: 242 AGNDVIAIGVLRAAAERLIRVPQDLSVIGFDDIQMSRYVYPALTTVGQSIMQLGETAAEM 301
             ND +A+GV  A  +  +R+PQ ++V+G+DDI+++RY+ P L+T+ Q    LGE A + 
Sbjct: 241 TSNDAMAVGVYHALYQAGMRIPQQMAVMGYDDIELARYLTPPLSTIHQPKDALGELAIDT 300

Query: 302 LLSRIATPHALPAEKRLVTPSVVVRES 328
           L+ R++ P A   +  ++TP +VVR S
Sbjct: 301 LIHRLSDPDA-SQQTLVLTPELVVRGS 326