Pairwise Alignments

Query, 730 a.a., PAS:GGDEF from Pseudomonas syringae pv. syringae B728a

Subject, 1258 a.a., Serine hydroxymethyltransferase (EC 2.1.2.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  390 bits (1002), Expect = e-112
 Identities = 244/616 (39%), Positives = 344/616 (55%), Gaps = 27/616 (4%)

Query: 107  DCLQVTYRFQLKNGTSRLLEGRARIYRDEQGQPVRLSGTLMDITQQCAQVALEASEEKFA 166
            DCL+        +G    +E R  +  DE G    + G   DI+QQ      E      A
Sbjct: 652  DCLRA-------DGRKIPIELRLVLVWDEHGAFEGVLGVGRDISQQRRA---EKDLRMAA 701

Query: 167  KAFHSSPDSITITEIDSGRYVEVNDGFSRLTGFSAHEVLGRTAHEVGIWTDTLQREHMLE 226
              F  S  +I IT+  +G  V+ N+ FSR++G++  +VL +  + + +  D  Q  H+  
Sbjct: 702  TVFEHSTSAILITD-PAGYIVQANEAFSRVSGYAVSQVLDQLPNMLTV--DEQQEAHLRY 758

Query: 227  ELRQKGRVHHREMDG------RDKHGAPLVLDISVEFITLNNTACLLMNARDIGALKNAQ 280
             L+Q  +  H   +G      R+    P  + I+       + A  +    DI   K ++
Sbjct: 759  VLKQLQQ--HSTWEGEVWLKRRNGEHYPAWVGITAVLDDEGDLASYVCFFSDISERKASE 816

Query: 281  AQIQHLAYHDPLTGLPNRALLLDRLSQQVSLLQHQNLRGALLFLDLDHFKHINDSLGHPV 340
             +I  LAY+D LT LPNR L  DRL   +     Q     L+FLDLD FK INDSLGH  
Sbjct: 817  QRIHRLAYYDALTHLPNRTLFQDRLHTALQSADRQKTWVVLMFLDLDRFKPINDSLGHAA 876

Query: 341  GDSVLSIIAARLEASVRQEDTVARLGGDEFVVLICGLEGSQDEVTRQVRELADNLRNLLA 400
            GD +L  +A RL   V  +DTVAR+GGDEF +L+      +  + R +  +A+ +   L 
Sbjct: 877  GDRMLKEMATRLLGCVADDDTVARMGGDEFTLLLQPRASREMALNRAIN-VAEQILASLV 935

Query: 401  EPMFLDGHRLQVTPSIGVVLIPDDGLTPADLLKRADIALYRAKDCGRNASQFFHVSMQQA 460
             P  L+G    VT SIG+ L P DG   + L+K AD A+Y AK+ G+N  QF+   M  +
Sbjct: 936  RPFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTAMYHAKERGKNNFQFYQADMNAS 995

Query: 461  VSQRLRLENDLRLALTRNEFHLHFQAQVDCRNEYITGAEALLRWQHPEYGLLAPDQFVQI 520
              +RL LE+DLR AL +NEF L++Q Q     + +TGAEALLRW+HP  GL+ P  F+ +
Sbjct: 996  ALERLELESDLRHALEQNEFVLYYQPQFSGDGKRLTGAEALLRWRHPRRGLVPPGDFIPV 1055

Query: 521  LEESGMILEVGSHILNEACKTGGLLLRQGLIPENRF-LMGVNISPRQFLQHDFIERVERS 579
            LEE G++++VG  ++ EAC+     LR     + R   + VNIS RQF       R+   
Sbjct: 1056 LEELGLVVDVGDWVITEACRQ----LRTWHQAKVRVPKVSVNISARQFSDGQLGTRIANI 1111

Query: 580  LTLHQLPASMLKLEITEGIVIQNLDDTILKMLSLKALGVSFAMDDFGTGYSSLTYLKRLP 639
            L    LP + L+LE+TE I+++ + + +  +  LK LG+S A+DDFGTGYSSL YLK+ P
Sbjct: 1112 LRSTGLPPACLELELTESILMREVSEAMQILAGLKNLGLSIAVDDFGTGYSSLNYLKQFP 1171

Query: 640  VDTLKIDQSFVQDATNDPNDAEIIRAIVAMAQSLNLNVIAEGVETSEQLAFLEKVGCYTY 699
            +D LKID++FV    +   DA+I RAI+AMA SLNL VIAEGVET EQL FL + GC   
Sbjct: 1172 IDVLKIDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHGCDEV 1231

Query: 700  QGYLFSEPLPGPQFES 715
            QGYLF  P+P  +FE+
Sbjct: 1232 QGYLFGRPMPANRFEA 1247



 Score = 35.0 bits (79), Expect = 2e-05
 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 109 LQVTYRFQLKNGTSRLLEGRAR-IYRDEQGQPVRLSGTLMDITQQC-AQVALEASEEKFA 166
           LQ   RF+ +NG  R  + R + + RD   Q  R+ G   D+T+Q  A  +L  SE+++ 
Sbjct: 506 LQCQLRFRHRNGKWRCFDIREQALARDRDNQVTRIIGVAKDVTEQIEASESLRDSEQRYR 565

Query: 167 KAFHSSPDSITITE 180
               S  D I  T+
Sbjct: 566 MLAESISDVIFSTD 579