Pairwise Alignments

Query, 339 a.a., tRNA-U16,U17-dihydrouridine synthase from Pseudomonas syringae pv. syringae B728a

Subject, 327 a.a., tRNA dihydrouridine(20/20a) synthase DusA from Vibrio cholerae E7946 ATCC 55056

 Score =  374 bits (960), Expect = e-108
 Identities = 188/316 (59%), Positives = 227/316 (71%), Gaps = 2/316 (0%)

Query: 20  SRRFSVAPMMDWTDHHCRYFMRKLSKHALLYTEMVTTGALLHGDRERFLRHDETEHPLAL 79
           S R SVAPM+DWTD HCRYF R LS   LLYTEMVTTGA++HG R  FL +++ EHP+AL
Sbjct: 4   SCRLSVAPMLDWTDRHCRYFHRLLSAQTLLYTEMVTTGAIIHG-RGDFLAYNQEEHPVAL 62

Query: 80  QLGGSTAADLAACSRLAQEAGYDEVNLNVGCPSDRVQNNMIGACLMAHPELVADCVKAMR 139
           Q GGS   DLA C++LAQE GYDE+NLNVGCPSDRVQN   GACLM  P+LVA+CV AMR
Sbjct: 63  QFGGSNPKDLAHCAKLAQERGYDEINLNVGCPSDRVQNGRFGACLMGEPDLVAECVAAMR 122

Query: 140 DAVGIPVTVKHRIGINGRDSYAELCDFVGKVQE-AGCESFTVHARIAILEGLSPKENRDI 198
             V IPVTVK RIGI+ +DSY  L  F+  V E  GCE FT+HAR A L GLSPKENR+I
Sbjct: 123 AVVDIPVTVKTRIGIDDQDSYEFLTQFIATVAEKGGCEQFTIHARKAWLSGLSPKENREI 182

Query: 199 PPLRYDVVAQLKSDFPGLEIVLNGGIKTLEQCSEHLQTFDGVMLGREAYHNPYLLAHVDQ 258
           PPL Y    Q+K DFP L I +NGG+K+LE+   HLQ  DGVM+GREAY NPYLLA VDQ
Sbjct: 183 PPLDYPRAYQIKRDFPHLTIAVNGGVKSLEEAKLHLQHLDGVMIGREAYQNPYLLAEVDQ 242

Query: 259 QLFGSTAPVISRYDALESMRPYIAAHIASGGNMHHVTRHMLGLGLGFPGARRFRQLLSVD 318
           Q+FG   PV  R   +  M PYI   ++ G ++ H+TRHMLGL    PGAR++R+ +S +
Sbjct: 243 QIFGLETPVKKRSQVIHEMMPYIERELSQGTHLGHMTRHMLGLFQNMPGARQWRRHISEN 302

Query: 319 IHKAENPMLLLDQAAA 334
            HK    + +++QA A
Sbjct: 303 AHKPGAGLEVVEQALA 318