Pairwise Alignments

Query, 339 a.a., tRNA-U16,U17-dihydrouridine synthase from Pseudomonas syringae pv. syringae B728a

Subject, 359 a.a., tRNA-dihydrouridine synthase A from Sinorhizobium meliloti 1021

 Score =  297 bits (760), Expect = 3e-85
 Identities = 161/330 (48%), Positives = 208/330 (63%), Gaps = 39/330 (11%)

Query: 28  MMDWTDHHCRYFMRKLSKHALLYTEMVTTGALLHGDRERFLRHDETEHPLALQLGGSTAA 87
           M+DWTD H R+F R+LS HALLYTEM+   A+L GDRE+ L HD +EHP+ALQLGGS  A
Sbjct: 1   MIDWTDRHYRFFARQLSSHALLYTEMIVADAILRGDREKLLGHDTSEHPVALQLGGSDPA 60

Query: 88  DLAACSRLAQEAGYDEVNLNVGCPSDRVQNNMIGACLMAHPELVADCVKAMRDAVGIPVT 147
            +A  +R+A+  GYDE+N+NVGCPSDRVQ+   GACLM  P LVADC+ AM+ AV IPVT
Sbjct: 61  KMAEAARIAEGFGYDEINMNVGCPSDRVQSGTFGACLMQEPALVADCIAAMKAAVKIPVT 120

Query: 148 VKHRIGINGRDSYAELCDFVGKVQEAGCESFTVHARIAILEGLSPKENRDIPPLRYDVVA 207
           VK RIG++ +D    L D V +V++AG ++  VHAR A L+GLSP+ENR+IPPL Y +V 
Sbjct: 121 VKCRIGVDDQDPEVALRDLVQRVKDAGTDAVWVHARKAWLKGLSPRENREIPPLDYGLVH 180

Query: 208 QLKSDFPGLEIVLNGGIKTLEQCSEHLQ--------------------TFDGVMLGREAY 247
           +LK++   L I LNGG++ L+Q   HL                       DGVMLGR AY
Sbjct: 181 RLKAENANLFIGLNGGLQRLDQALSHLDPLSLPTGGTTGTAAEPACGAPLDGVMLGRAAY 240

Query: 248 HNPYLLAHVD----QQLFGSTAPVISR---------------YDALESMRPYIAAHIASG 288
           H+  LL   D      L G+    + R                   ++M  Y AAHI +G
Sbjct: 241 HDSGLLTAADGYFVHPLTGAEPMPVDRDGFSDHDHKLSLDFWSGIRDAMADYAAAHIENG 300

Query: 289 GNMHHVTRHMLGLGLGFPGARRFRQLLSVD 318
           G + HVTRHM+GL  G+PGARR+RQ+LS +
Sbjct: 301 GRLIHVTRHMVGLFQGWPGARRYRQILSTE 330