Pairwise Alignments

Query, 339 a.a., tRNA-U16,U17-dihydrouridine synthase from Pseudomonas syringae pv. syringae B728a

Subject, 349 a.a., Dihydrouridine synthase TIM-barrel protein yjbN (NCBI) from Rhodospirillum rubrum S1H

 Score =  332 bits (850), Expect = 1e-95
 Identities = 169/302 (55%), Positives = 209/302 (69%), Gaps = 7/302 (2%)

Query: 21  RRFSVAPMMDWTDHHCRYFMRKLSKHALLYTEMVTTGALLHGDRERFLRHDETEHPLALQ 80
           RR SVAPMMDWTD H R+F+R+++K  LLYTEM+T  ALLH D  RFL H   EHPLALQ
Sbjct: 19  RRLSVAPMMDWTDRHDRWFLRQITKRTLLYTEMITAQALLHADPGRFLDHHPDEHPLALQ 78

Query: 81  LGGSTAADLAACSRLAQEAGYDEVNLNVGCPSDRVQNNMIGACLMAHPELVADCVKAMRD 140
           LGGS    LA  +RLA   G+ E+NLNVGCPSDRV +   GACLMA P LVA+C+ AM +
Sbjct: 79  LGGSDPRALAEATRLAAPFGFAEINLNVGCPSDRVSSGRFGACLMADPALVAECLSAMAE 138

Query: 141 AVGIPVTVKHRIGINGRDSYAELCDFVGKVQEAGCESFTVHARIAILEGLSPKENRDIPP 200
           A   PVT+KHRIGI+  DSY +L  FV +V  +G  +  VHAR A L+GLSPKENR+IPP
Sbjct: 139 ASNAPVTIKHRIGIDDLDSYDQLVGFVDQVARSGIATIIVHARKAWLKGLSPKENREIPP 198

Query: 201 LRYDVVAQLKSDFPGLEIVLNGGIKTLEQCSEHL-------QTFDGVMLGREAYHNPYLL 253
           LR+DVV +LK+DFPGLE++LNGGI TL Q  +HL          DGVM+GR AY  PY+L
Sbjct: 199 LRHDVVHRLKADFPGLEVILNGGITTLTQALDHLGSGDPAAPAVDGVMIGRAAYETPYML 258

Query: 254 AHVDQQLFGSTAPVISRYDALESMRPYIAAHIASGGNMHHVTRHMLGLGLGFPGARRFRQ 313
           A  D  +FG   P  SR++   ++ PY+ A  A G  +  +TRH+LGL  G PGAR +R+
Sbjct: 259 AQADGLIFGEATPAPSRHEVALALLPYLDAMTARGEPVKRLTRHILGLFHGQPGARAYRR 318

Query: 314 LL 315
            L
Sbjct: 319 HL 320