Pairwise Alignments

Query, 288 a.a., carbohydrate ABC transporter membrane protein 1, CUT1 family from Pseudomonas syringae pv. syringae B728a

Subject, 288 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  409 bits (1052), Expect = e-119
 Identities = 196/286 (68%), Positives = 233/286 (81%), Gaps = 1/286 (0%)

Query: 1   MRKVQNNKAWWLVMPVFLLVAFSAIIPMMTVVNYSVQDIFDQSSRYFVGTDWFRQVLQDP 60
           M K  NNKAW++V+PV +LVAFSA+IP+MTVVNYSVQD F  +  ++ GTDWF  VL+  
Sbjct: 1   MEKTWNNKAWFMVLPVLVLVAFSAVIPLMTVVNYSVQDTFGNNEFFWAGTDWFLDVLESD 60

Query: 61  RLHDSLLRQFIYSGCVLLIEIPLGIAIALTMPTKGRWSSLCLIVMTIPLLIPWNVVGTIW 120
           R  D+L R  I+S  +L IEIPLGI IAL MP +G    +CL++M +PLLIPWNVVGTIW
Sbjct: 61  RFWDALTRNLIFSAIILAIEIPLGIVIALNMPKRGIGVPICLVLMALPLLIPWNVVGTIW 120

Query: 121 QIFGRGDIGLLGYTLNNVLGINYNYAANASDAWVTVLVIDVWHWTSLVALLCYSGLRAIP 180
           Q+FGR DIGLLG TL + LGINYNY  N  DAWVT++V+DVWHWTSLV LLCY+GL +IP
Sbjct: 121 QVFGRVDIGLLGRTLAS-LGINYNYVQNPLDAWVTLIVMDVWHWTSLVVLLCYAGLVSIP 179

Query: 181 DVYYQAARIDRASGWAIFRHIQLPKMKSVLLIAVMLRFMDSFMIYTEPFVLTGGGPGNST 240
           D YYQAA+ID AS W++FR+IQLPKMK VLLIA +LRFMDSFMIYTEPFV+TGGGPGNST
Sbjct: 180 DAYYQAAKIDGASRWSVFRYIQLPKMKRVLLIAFLLRFMDSFMIYTEPFVVTGGGPGNST 239

Query: 241 TFLSQTLTTMALGQFDLGPAAAFSLVYFLIILLVSWVFYTAMTHSE 286
           TFLS  L   A+GQFDLGPAAA S++YFLIILL+SW+FYT MT S+
Sbjct: 240 TFLSIDLVKTAIGQFDLGPAAALSIIYFLIILLLSWIFYTVMTTSD 285