Pairwise Alignments

Query, 288 a.a., carbohydrate ABC transporter membrane protein 1, CUT1 family from Pseudomonas syringae pv. syringae B728a

Subject, 298 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  127 bits (318), Expect = 4e-34
 Identities = 84/286 (29%), Positives = 148/286 (51%), Gaps = 6/286 (2%)

Query: 1   MRKVQNNKAWWLVMPVFLLVAFSAIIPMMTVVNYSVQDIFDQSSRY--FVGTDWFRQVLQ 58
           + +      W+L +P  L++A +   P++  V  S+ D    +  Y  FVG D +   L 
Sbjct: 12  LERADRRFGWFLTLPGVLMLAATIAFPLLWAVATSLFDFTLIAPTYDTFVGLDNYALALG 71

Query: 59  DPR-LHDSLLRQ-FIYSGCVLLIEIPLGIAIALTMPTKGRWSSLCLIVMTIPLLIPWNVV 116
           +   LH S L   F+ +  V+LIE  +G  IAL +    R   +   ++  PLLI   VV
Sbjct: 72  NTEFLHASWLTVGFVVA--VVLIEFAIGFLIALMLNGVRRGKPIYYAILLCPLLINPVVV 129

Query: 117 GTIWQIFGRGDIGLLGYTLNNVLGINYNYAANASDAWVTVLVIDVWHWTSLVALLCYSGL 176
           G +W++     +G+  Y L  +     N+  + + A+ T++ +D+WH  S + +L  +GL
Sbjct: 130 GLVWRMVLHPTLGVANYALGLIGLSPVNWLGDVTVAFWTLVGVDIWHQVSFMIVLLLAGL 189

Query: 177 RAIPDVYYQAARIDRASGWAIFRHIQLPKMKSVLLIAVMLRFMDSFMIYTEPFVLTGGGP 236
            A+P   Y+AAR+D AS +  F HI LP M+ V+L+ +++R + +   Y   +++T GGP
Sbjct: 190 SALPAEPYEAARVDGASVFQRFWHITLPLMRRVILVTLLIRMIFAVKTYDLVYIMTRGGP 249

Query: 237 GNSTTFLSQTLTTMALGQFDLGPAAAFSLVYFLIILLVSWVFYTAM 282
           G +T  +S ++   A    +LG A A + +  + +L ++   Y  M
Sbjct: 250 GTATDLVSYSIYRTAFVGLNLGQATAMAGLLLIPVLGITAYLYRLM 295