Pairwise Alignments

Query, 288 a.a., carbohydrate ABC transporter membrane protein 1, CUT1 family from Pseudomonas syringae pv. syringae B728a

Subject, 316 a.a., binding protein-dependent transport system, inner membrane component from Phaeobacter inhibens DSM 17395

 Score = 99.8 bits (247), Expect = 7e-26
 Identities = 70/262 (26%), Positives = 124/262 (47%), Gaps = 4/262 (1%)

Query: 15  PVFLLVAFSAIIPMMTVVNYSVQDI--FDQSSRYFVGTDWFRQVLQDPRLHDSLLRQFIY 72
           P+ LL+    +IP++  ++YS Q I   +  +  +VG + + ++  D +   +L   F +
Sbjct: 39  PMILLIGSVMLIPLIVGISYSFQSIELLNPFATGWVGFENYEKLWSDRKFWIALENTFFW 98

Query: 73  SGCVLLIEIPLGIAIALTMPTKGRWSSLCLIVMTIPLLIPWNVVGTIWQIFGRGDIGLLG 132
           +   +  +  LG+ +A+ + T+     L   ++ +P  +P  +    W       IG + 
Sbjct: 99  TFWSIFFQFFLGLGLAMLLNTQFFGKKLFQALVFLPWAVPTFLSALTWAWLFNPVIGPIP 158

Query: 133 YTLN--NVLGINYNYAANASDAWVTVLVIDVWHWTSLVALLCYSGLRAIPDVYYQAARID 190
           + L    VL   YN   +   A    +  ++W      A+   + L++IP   Y+AA ID
Sbjct: 159 HWLAALGVLSEPYNILGDPDLAIWGPITANIWFGVPFFAITLLAALQSIPGELYEAAEID 218

Query: 191 RASGWAIFRHIQLPKMKSVLLIAVMLRFMDSFMIYTEPFVLTGGGPGNSTTFLSQTLTTM 250
            A+ W  F  I LP +  ++ I VMLR +         FV+TGGGP NST  LS  + T 
Sbjct: 219 GATPWQSFTKITLPFLAPMIAITVMLRTIWIANFADLIFVMTGGGPANSTQILSTYIFTT 278

Query: 251 ALGQFDLGPAAAFSLVYFLIIL 272
           A  + D G A+  ++   +I+L
Sbjct: 279 AFRKLDFGYASTIAVALLIILL 300