Pairwise Alignments

Query, 288 a.a., carbohydrate ABC transporter membrane protein 1, CUT1 family from Pseudomonas syringae pv. syringae B728a

Subject, 318 a.a., ABC transporter permease from Burkholderia phytofirmans PsJN

 Score =  125 bits (315), Expect = 9e-34
 Identities = 77/280 (27%), Positives = 141/280 (50%), Gaps = 6/280 (2%)

Query: 9   AWWLVMPVFLLVAFSAIIPMMTVVNYSVQDIFDQSSRY---FVGTDWFRQVLQDPRLHDS 65
           AW  ++P  LL+    I P++  +  S  +           FVG D +  +L D  +  +
Sbjct: 33  AWLFILPTVLLLLAINIFPLIWALRLSFTNFKSNMPSVPARFVGIDNYVDILTDEDIWYA 92

Query: 66  LLRQFIYSGCVLLIEIPLGIAIALTMPTKGRWSSLCLIVMTIPLLIPWNVVGTIWQIFGR 125
           +     +    + +E+ LG  +AL +  + R  S    ++ +P+++   VVG  W    +
Sbjct: 93  MQVTARFVFWSVGLEVLLGFGLALLINRQFRGHSFWTTLILLPMMLSPAVVGNFWTFLLQ 152

Query: 126 GDIGLLGYTLNNVLGI---NYNYAANASDAWVTVLVIDVWHWTSLVALLCYSGLRAIPDV 182
              GL    +    GI   ++    + S A  T++++D W WT  V L+C +GLR+IPD 
Sbjct: 153 PQTGLFNDIVGFFTGIAPGSFQMIGDVSLAPWTIVMVDTWMWTPYVMLICLAGLRSIPDY 212

Query: 183 YYQAARIDRASGWAIFRHIQLPKMKSVLLIAVMLRFMDSFMIYTEPFVLTGGGPGNSTTF 242
            Y+AA +DRA+ W  F  I LP     L++AV+ R +++F ++    +LT GGPG+ T  
Sbjct: 213 IYEAAEVDRATPWRQFWSITLPMTLPFLMLAVLFRGIENFKMFDMVNLLTSGGPGSVTET 272

Query: 243 LSQTLTTMALGQFDLGPAAAFSLVYFLIILLVSWVFYTAM 282
           +S TL   A  ++  G ++A +++ F+ +   + ++  A+
Sbjct: 273 VSITLKRAAFEKWQTGYSSALAIILFVTVFGAANIYVKAL 312