Pairwise Alignments

Query, 448 a.a., replicative DNA helicase (phage and plasmid) from Pseudomonas syringae pv. syringae B728a

Subject, 464 a.a., replicative DNA helicase from Rhodanobacter denitrificans MT42

 Score =  390 bits (1001), Expect = e-113
 Identities = 213/446 (47%), Positives = 299/446 (67%), Gaps = 10/446 (2%)

Query: 8   PPHSVEAEQAVLGGLMLDNDSWDLIADRIKADDFYRAEHRLIFQSIAGLAESNRPFDVVT 67
           PPHS+EAEQAVLGGLML  D+ D +ADR+  DDFYR +HRLI+++I  LA    P D VT
Sbjct: 20  PPHSIEAEQAVLGGLMLAPDALDKVADRLAEDDFYRKDHRLIWRAINELANKGMPCDAVT 79

Query: 68  VSD---SITAIDAAGGLAYLSELAKNTPSVANIKAYAETVSNRAHLRRIISHGYACTREA 124
           + D   S   ++  GG  YL ELA +TPS ANI AYAE V  ++ LR++I  G + T + 
Sbjct: 80  LGDWFESNGLVEMVGGAGYLIELANSTPSAANIAAYAEIVREKSVLRQLIDAGTSITEDG 139

Query: 125 SDPQANA-SEVQDVIEQQLFALGQG--RQTSDFVDVNQMLMQVVDKIDLRFNAGESVVGL 181
             P+  +  EV +  EQ++F + +   R   D V + + +      +  R+     + G+
Sbjct: 140 YRPEGKSVHEVLESAEQRVFHIAESGARGKKDSVSMREAVKDAFRLLTERYENRGQLTGV 199

Query: 182 PTGLSDLDELTGGLQPADLIIIAARPSMGKTSLALNLVDAALQKDTQATVQVYSLEMPAE 241
            TG +DLD LT GLQP+DLII+AARPSMGKT+ ALN+ +AA     +A V V+S+EM + 
Sbjct: 200 STGFTDLDRLTSGLQPSDLIIVAARPSMGKTAFALNIAEAAALGGKKAVV-VFSMEMSSS 258

Query: 242 AIIYRLISILGHLNLEKLIRGQLEDEDWPKLAMAVQKINSYGDRLVIDDQADLTPSAIRA 301
            + +RLIS +G ++ + L  G L++EDWP+++ A+  ++    ++ IDD   L+P  +R+
Sbjct: 259 QLAFRLISSVGRIHQQHLRNGDLQEEDWPRVSNAIALLSEA--KIFIDDTPGLSPVELRS 316

Query: 302 RARRGARRFGKPVLILIDYLQMMKCPG-KENRTNEISEISRSLKALAKEFDCPVVALSQL 360
           RARR  R  G   LI+IDYLQ+M+ PG KENR  EISEISRSLK LAKE + PV+ALSQL
Sbjct: 317 RARRLHREHGGLGLIVIDYLQLMQVPGNKENRATEISEISRSLKGLAKELNVPVIALSQL 376

Query: 361 NRELERRPNKRPINADLRESGALEQDADLILFVYRDEVYNPDSEQKGVAELILSKHRNGA 420
           NR LE+R +KRP+ +DLRESGA+EQDAD+I+F+YRDE YN +S  KGVAE+I+ K RNG 
Sbjct: 377 NRSLEQRADKRPMMSDLRESGAIEQDADVIMFIYRDEYYNKESPDKGVAEIIIGKQRNGP 436

Query: 421 LGTVRTAFIPQHTRFENLSAAAWQGA 446
             T +  F+  +T+F N ++ ++ G+
Sbjct: 437 TDTCKLTFLGHYTQFVNYASDSFVGS 462