Pairwise Alignments

Query, 448 a.a., replicative DNA helicase (phage and plasmid) from Pseudomonas syringae pv. syringae B728a

Subject, 468 a.a., primary replicative DNA helicase (RefSeq) from Shewanella sp. ANA-3

 Score =  400 bits (1029), Expect = e-116
 Identities = 211/445 (47%), Positives = 307/445 (68%), Gaps = 10/445 (2%)

Query: 8   PPHSVEAEQAVLGGLMLDNDSWDLIADRIKADDFYRAEHRLIFQSIAGLAESNRPFDVVT 67
           PPHS+EAEQ+VLGGLMLD D+WD +A+ +  +DFY   HR+IF ++  L ES +P D++T
Sbjct: 24  PPHSIEAEQSVLGGLMLDADAWDKVAETVVKEDFYSRSHRMIFAAMHRLVESGQPIDLIT 83

Query: 68  VSDSITA---IDAAGGLAYLSELAKNTPSVANIKAYAETVSNRAHLRRIISHGYACTREA 124
           VS+ +     ++ AGG AYL E+AKNTPS  NI +YAE V  RA +R +I   +      
Sbjct: 84  VSEQLEVENQLEEAGGFAYLGEIAKNTPSAGNIVSYAEIVRERAVVREMIRVAHEIADAG 143

Query: 125 SDPQA-NASEVQDVIEQQLFALGQGRQTSDF--VDVNQMLMQVVDKIDLRFNAGES-VVG 180
            +P+  ++S + D+ E ++F + + R  ++     +  +L + VDKI+  +N   + V G
Sbjct: 144 YNPEGRDSSALLDLAESKVFKIAEQRTNANEGPEGIKTILEKTVDKIEQLYNNPHNGVTG 203

Query: 181 LPTGLSDLDELTGGLQPADLIIIAARPSMGKTSLALNLVDAALQKDTQATVQVYSLEMPA 240
           + +G SDLD +T G Q  DLII+AARPSMGKT+ A+NL + A   + +  V ++SLEMP+
Sbjct: 204 VSSGFSDLDRMTAGFQSGDLIIVAARPSMGKTTFAMNLCEQAAMNEDKP-VLIFSLEMPS 262

Query: 241 EAIIYRLISILGHLNLEKLIRGQLEDEDWPKLAMAVQKINSYGDRLVIDDQADLTPSAIR 300
           E I+ R+++ LG ++  K+  GQL+DEDW +++  +  +   G ++ IDD + LTP+ +R
Sbjct: 263 EQIMMRMLASLGRVDQTKIRTGQLDDEDWARVSSTMGIMLEQG-KMYIDDGSGLTPTEVR 321

Query: 301 ARARRGARRFGKPVLILIDYLQMMKCPG-KENRTNEISEISRSLKALAKEFDCPVVALSQ 359
           +RARR AR  G   +I++DYLQ+M+ P   +NRT EI+EISRSLKALAKE + PV+ALSQ
Sbjct: 322 SRARRIAREHGGLSMIMVDYLQLMQVPALSDNRTLEIAEISRSLKALAKELEIPVIALSQ 381

Query: 360 LNRELERRPNKRPINADLRESGALEQDADLILFVYRDEVYNPDSEQKGVAELILSKHRNG 419
           LNR LE+R +KRP+N+DLRESG++EQDADLI+F+YRDEVYN DS  KG AE+I+ K RNG
Sbjct: 382 LNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNNDSPDKGTAEIIIGKQRNG 441

Query: 420 ALGTVRTAFIPQHTRFENLSAAAWQ 444
            +G VR  F  Q +RF+N +   ++
Sbjct: 442 PIGRVRLTFQGQFSRFDNYAGPQFE 466