Pairwise Alignments

Query, 539 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

Subject, 541 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  436 bits (1120), Expect = e-126
 Identities = 242/541 (44%), Positives = 361/541 (66%), Gaps = 2/541 (0%)

Query: 1   MRLRNINLAPRATLFFSAIILLVVVLGVIAILQMGKLRDTEKDVELNWLPSIRQTAMMNS 60
           M LR +N+APRA L F+ I +LV +LGV A+ QM  +RD+E  VE  WLPSIR    +  
Sbjct: 1   MVLRQLNIAPRAALGFALIAVLVALLGVFALGQMSSIRDSEVAVETQWLPSIRGGDEIRE 60

Query: 61  TVLRVRLETQRAVAD--PQTVQQTIVKFPAYRKAMKDAVYNYETLIASDQERQLFLAVKK 118
            +LR+R  + R   D  P+ +     +     K + + +  YE L+ + + + L+   K+
Sbjct: 61  WMLRIRTISLRMALDQDPKNIAVYRGQMDTRDKELSEKIAAYEKLVVTPEGKALYDQFKQ 120

Query: 119 SYDDYASQLDLLEPLLKAGDTASIVKLVATGIRPLTNQMETQVEELTQFNNKGAALAGVQ 178
           ++  Y + +     L + G    ++KL+   ++ + +    Q+ +L +  +K  ++   +
Sbjct: 121 TFAAYRTGIAQSFTLAEQGRRDELIKLLLVDMKTVVDGSGKQLNDLAELFSKQVSIESQK 180

Query: 179 ATQVYDSGLYIVIGLIIFVALLTLCLATLLTKTITSPIGSALSVAERIASSDLTKEVEVS 238
           + + Y +   +V   ++F AL T+ LA LLT++I  P+G AL+ AE +A  DLT+ +E  
Sbjct: 181 SQEHYANSRMVVSLFVVFAALATVALAMLLTRSIVKPLGEALNAAENVARGDLTRPIETH 240

Query: 239 GTDEAGRLLSALATMQQNLRSTIMQIADSSSQLAAASEEMTAVTEQSSLGLVSQNDEVNQ 298
           G DE  RLL ALA MQQNLR T+  I+ S++QLA A++E+ AVT  S+  L  QN+E+ Q
Sbjct: 241 GNDEVSRLLKALAAMQQNLRETLQGISGSAAQLATAADELNAVTLDSTQSLQQQNNEIEQ 300

Query: 299 AATAVTEMSAAVDEVARNAESASEESRKGQGYTEVGLERVSQTLKSIEKLSSNVRDTSEQ 358
           AATAVTEM+ AV+EVARNA S S+ +R+      +G +RVS T+ +I  L+S+V+ T   
Sbjct: 301 AATAVTEMTTAVEEVARNAVSTSDATRQSSESASLGQQRVSDTVDAIGALASDVQVTGGL 360

Query: 359 ITGLSNRAQNISKVVEVIRAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRT 418
           +  L+N++Q+I KV++VIRAIAEQTNLLALNAAIEAARAGE GRGFAVVADEVRALA+RT
Sbjct: 361 VQSLANQSQDIGKVLDVIRAIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRALAYRT 420

Query: 419 QVSTQEIEQMIQAIQNDSDQAVKAMATSRELAAESLSVAGDASSSLDQIATAITGINERN 478
           Q STQEIEQM+Q +++ + QA+ +M  S   AA +L++A  A  +L  I  ++  I+ERN
Sbjct: 421 QQSTQEIEQMVQGMRSGATQALDSMQASSSRAASTLAMAERAGDALQTITASVNEIHERN 480

Query: 479 ILIATASEEQAHVAREVDRNLVSIRELASQSSAGASQTASACNEMSKLAVSLNQLVNRFK 538
           ++IA+A+EEQA VAREVDRNLV+IR+L+ +S++GA QT+++ +E+S+LA SL  +V RF+
Sbjct: 481 LVIASAAEEQAQVAREVDRNLVNIRDLSVRSASGADQTSASSHELSQLANSLRTMVQRFQ 540

Query: 539 V 539
           V
Sbjct: 541 V 541