Pairwise Alignments

Query, 539 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

Subject, 541 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3

 Score =  434 bits (1115), Expect = e-126
 Identities = 247/541 (45%), Positives = 355/541 (65%), Gaps = 2/541 (0%)

Query: 1   MRLRNINLAPRATLFFSAIILLVVVLGVIAILQMGKLRDTEKDVELNWLPSIRQTAMMNS 60
           M LRN+N+APRA L F+ I  L++ LGV A+ QM K+R + + +  N +PSI+       
Sbjct: 1   MSLRNMNIAPRAFLGFALIGALMLALGVFALSQMSKIRTSGESIAQNSVPSIKALNEFTQ 60

Query: 61  TVLRVRLETQRAVA--DPQTVQQTIVKFPAYRKAMKDAVYNYETLIASDQERQLFLAVKK 118
             LR+R+ + R +   +P   Q+T        + ++ A   YE LI++  ER  +    +
Sbjct: 61  LTLRLRVLSYRLLVNREPDIQQKTYDLLEQRSQQIRAAQTTYEKLISASDERAAYDQYVQ 120

Query: 119 SYDDYASQLDLLEPLLKAGDTASIVKLVATGIRPLTNQMETQVEELTQFNNKGAALAGVQ 178
               Y    + ++ L +      +  L+ T +   ++ +   ++ L + NN  A      
Sbjct: 121 LLGQYRQLEERMKTLSRNNQVDELRALLNTELLSNSDAINAAIDHLVEINNLQAEALNKG 180

Query: 179 ATQVYDSGLYIVIGLIIFVALLTLCLATLLTKTITSPIGSALSVAERIASSDLTKEVEVS 238
           A Q Y S    V+ L++    LTL  A LLT +IT PI +AL  AE IA  +LT+ + V 
Sbjct: 181 AAQQYSSAFNWVVALLVIATGLTLLFAWLLTNSITKPIANALDAAEEIAKGNLTRPITVD 240

Query: 239 GTDEAGRLLSALATMQQNLRSTIMQIADSSSQLAAASEEMTAVTEQSSLGLVSQNDEVNQ 298
           G+DEAGRLL A++TMQ+ LR T+ +I+ S++QLA+A+EE+ AVT++S+ GL  QN+E+ Q
Sbjct: 241 GSDEAGRLLRAMSTMQEKLRDTLQRISGSATQLASAAEELNAVTDESARGLTQQNNEIEQ 300

Query: 299 AATAVTEMSAAVDEVARNAESASEESRKGQGYTEVGLERVSQTLKSIEKLSSNVRDTSEQ 358
           AATAV EM++AV+EVARNA S SE S+        G + V +T+ +IE++S++V+ T+  
Sbjct: 301 AATAVNEMTSAVEEVARNAVSTSEASKHATTSAGDGRDLVQETVGAIERMSADVQSTATL 360

Query: 359 ITGLSNRAQNISKVVEVIRAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRT 418
           I  L+N +++I KV++VIR +A+QTNLLALNAAIEAARAGE GRGFAVVADEVRALAHRT
Sbjct: 361 IGNLANESRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRT 420

Query: 419 QVSTQEIEQMIQAIQNDSDQAVKAMATSRELAAESLSVAGDASSSLDQIATAITGINERN 478
           Q ST EIE+MI +IQ+ ++ AV +M  S E A  +L++A  A  SLD I TAI  INERN
Sbjct: 421 QQSTSEIERMIGSIQSGTEHAVDSMRNSTERAESTLNIARGAGLSLDTINTAIVEINERN 480

Query: 479 ILIATASEEQAHVAREVDRNLVSIRELASQSSAGASQTASACNEMSKLAVSLNQLVNRFK 538
           ++IA+A+EEQA VAREVDRNLV+IR+L+ QS+ GA+QT +A  E+S+LAV LN +V RF 
Sbjct: 481 LVIASAAEEQAQVAREVDRNLVNIRDLSVQSATGANQTTAASAELSRLAVDLNSMVGRFS 540

Query: 539 V 539
           +
Sbjct: 541 L 541