Pairwise Alignments

Query, 539 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  448 bits (1153), Expect = e-130
 Identities = 251/539 (46%), Positives = 357/539 (66%)

Query: 1   MRLRNINLAPRATLFFSAIILLVVVLGVIAILQMGKLRDTEKDVELNWLPSIRQTAMMNS 60
           M +RN+N++ R+ L F  I L+V++LG+ AILQMGK+R     +   WLPSI     +N 
Sbjct: 1   MLVRNMNVSQRSALGFGLIGLIVLLLGLFAILQMGKIRSEAAKLSDEWLPSIVALGDLNQ 60

Query: 61  TVLRVRLETQRAVADPQTVQQTIVKFPAYRKAMKDAVYNYETLIASDQERQLFLAVKKSY 120
             LR R+ T R + D   V++       +R  +      Y+  +   QER+LF   +++ 
Sbjct: 61  HTLRTRIHTLRLIIDRTRVEENRATLARFRNELSSLEDAYQRTVDHPQERELFQNYQRAR 120

Query: 121 DDYASQLDLLEPLLKAGDTASIVKLVATGIRPLTNQMETQVEELTQFNNKGAALAGVQAT 180
             +   L  +  L   G     V++V + +      +   V  +T FNN+ +AL+   A 
Sbjct: 121 TAFDEVLSEIVRLEGQGRIEEAVEVVGSRLNTAGTGLNEAVARMTAFNNEQSALSAASAA 180

Query: 181 QVYDSGLYIVIGLIIFVALLTLCLATLLTKTITSPIGSALSVAERIASSDLTKEVEVSGT 240
            ++ S    +IG I+   LLT+ LA + T++I  P+  A+S+AE +AS DLT+ +++ G 
Sbjct: 181 AIFQSSQAWMIGTIVLAVLLTVVLAWIFTRSIVQPLQQAVSIAEVVASGDLTRHIDIVGR 240

Query: 241 DEAGRLLSALATMQQNLRSTIMQIADSSSQLAAASEEMTAVTEQSSLGLVSQNDEVNQAA 300
           DE  RLL+AL +MQ+ LR TI  I+ SSSQLA+A+E++  VTE S+ G+  Q+ E+ QAA
Sbjct: 241 DEPARLLTALRSMQERLRGTIQSISHSSSQLASAAEQLNVVTEDSTRGMNQQSHEIEQAA 300

Query: 301 TAVTEMSAAVDEVARNAESASEESRKGQGYTEVGLERVSQTLKSIEKLSSNVRDTSEQIT 360
           TAV EM+AAVDEVARNA + SE SR      + G  +V +T+ SI +L+ +V  TS ++ 
Sbjct: 301 TAVNEMTAAVDEVARNAVATSEASRDSDATAQHGRNQVIRTVDSIGQLAGDVTQTSAEVE 360

Query: 361 GLSNRAQNISKVVEVIRAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQV 420
            L+ + ++ISKV++VIR+IAEQTNLLALNAAIEAARAG+ GRGFAVVADEVRALAHRTQ 
Sbjct: 361 RLAAQVRDISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALAHRTQQ 420

Query: 421 STQEIEQMIQAIQNDSDQAVKAMATSRELAAESLSVAGDASSSLDQIATAITGINERNIL 480
           STQEIEQMI  +   +D+AV+AM  S E A  +L +A  A  +L++IA AI+ I+ERN++
Sbjct: 421 STQEIEQMIGDVHQGTDRAVQAMQVSNERARTTLDLARAAGEALEEIAAAISQISERNLV 480

Query: 481 IATASEEQAHVAREVDRNLVSIRELASQSSAGASQTASACNEMSKLAVSLNQLVNRFKV 539
           IA+ASEEQA VAREVDRNLV+IR+L+ QSSAGASQ+++A  E+++LAV LN LV  F+V
Sbjct: 481 IASASEEQAQVAREVDRNLVNIRDLSLQSSAGASQSSAASQELARLAVGLNGLVGGFRV 539