Pairwise Alignments

Query, 247 a.a., SSU ribosomal protein S2P from Pseudomonas syringae pv. syringae B728a

Subject, 242 a.a., ribosomal protein S2 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  337 bits (863), Expect = 2e-97
 Identities = 167/240 (69%), Positives = 195/240 (81%), Gaps = 3/240 (1%)

Query: 1   MSQVNMRDMLKAGCHFGHQTRYWNPKMGKYIFGARNKIHIINLEKTLPMFNEALTFVERL 60
           M+ V+MRDML+AG HFGHQTRYWNPKM  +IFGARN +HIINLE T+PMFNEAL F+  +
Sbjct: 1   MTTVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNV 60

Query: 61  ASGKNKILFVGTKRSAGKIVAEEAARCGSPYVDHRWLGGMLTNFKTIRQSIKRLRELEVQ 120
           AS K K+LFVGTKR+AG+ + E A  C   YVDHRWLGGMLTN+KT+RQSIKRL+ELE Q
Sbjct: 61  ASKKGKVLFVGTKRAAGEAIKEAAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELESQ 120

Query: 121 AEDGTFAKLTKKEALMRTRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLG 180
           + DGTF KLTKKEALMRTR+LEKL++SLGGIK+MGGLPD LFVI  DHE IAI EAN LG
Sbjct: 121 SVDGTFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLG 180

Query: 181 IPVIGVVDTNSSPEGVDYIIPGNDDAIRAIQLYMGSMADAVIRGRNN---VAGGTDVFVE 237
           IPV+ VVDTNS+P+GV+YI+PGNDDA+RAI+LY  S+A A   GR     V    D FVE
Sbjct: 181 IPVVAVVDTNSAPDGVNYIVPGNDDAMRAIRLYTTSVAAAANAGRGQDLAVQAEQDGFVE 240