Pairwise Alignments

Query, 269 a.a., 23S rRNA m(1)G-745 methyltransferase from Pseudomonas syringae pv. syringae B728a

Subject, 271 a.a., ribosomal RNA large subunit methyltransferase A (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  186 bits (472), Expect = 5e-52
 Identities = 100/251 (39%), Positives = 154/251 (61%), Gaps = 12/251 (4%)

Query: 4   CPICSAPLSTADNGVVCPANHRFDRARQGYLNLLPVQHKNSRDPGDNQAMVEARRDFLNA 63
           CP+C+ PL+  +    CP +H+FD A++GY+NLLPVQ KNS+DPGDNQ M+ ARR+FLNA
Sbjct: 5   CPLCALPLALTERTWGCPQSHKFDMAKEGYVNLLPVQKKNSKDPGDNQQMMFARREFLNA 64

Query: 64  GHYAPVARRLAELAAE--RSPAHWLDIGCGEGYYTAQIAEALP-----HADGYALDISRE 116
           G+Y  ++ R+ +LA +   S    LDIGCGEGYY+ ++  AL      H  G  +DIS+ 
Sbjct: 65  GYYQNLSDRVNQLALQYASSAKQILDIGCGEGYYSHRLYNALVAHHSCHLQG--VDISKS 122

Query: 117 AVKRACRRDPALTWMVASMARVPLADASCQFLASVFSPLDWQEAKRLLTPGGGLMRVGPT 176
           A+K A +R   L++ VAS   +P++  S      +++P   +E +R++ PGG L+ V P 
Sbjct: 123 AIKYAAKRYQNLSFCVASAYEIPISSNSVDLAIRIYAPSKVEELQRIMAPGGILITVSPG 182

Query: 177 NEHLMELRQRLYDEVRDYADDKHLSLVPQGMQLQHSETLRYTLKLIDGQSRADLLAMTPH 236
             H   L+Q++YD+ R + + +      +G +  H E LR  L L   Q  ++ L MTP+
Sbjct: 183 PLHHFALKQQIYDQPRLHPESEARI---EGFESLHQERLRSQLVLNHSQDISNFLEMTPY 239

Query: 237 GWRASAERRAA 247
            W+ +AE++ A
Sbjct: 240 AWKFTAEQKQA 250