Pairwise Alignments

Query, 540 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  197 bits (502), Expect = 6e-55
 Identities = 142/546 (26%), Positives = 260/546 (47%), Gaps = 15/546 (2%)

Query: 1   MKNWTLRQRILASFAVIIAIMLLMVVVSYSRLLSIESSEEDVRLDALPGVYYSTLVRSAW 60
           ++N  + QR    F +I  I+LL+ + +  ++  I S    +  + LP +     +    
Sbjct: 3   VRNMNVSQRSALGFGLIGLIVLLLGLFAILQMGKIRSEAAKLSDEWLPSIVALGDLNQHT 62

Query: 61  GESYIRTLELIAEGQGRPLTKQERDQFQGFDENLQAQMDGYKKSIFDDTDRDSFALFEKR 120
             + I TL LI +   R   ++ R     F   L +  D Y++++    +R+ F  +++ 
Sbjct: 63  LRTRIHTLRLIID---RTRVEENRATLARFRNELSSLEDAYQRTVDHPQERELFQNYQRA 119

Query: 121 REAYSRMLADVHAKYDRGDYAGARAEFYGEVNPVWLAGRKQLNDLIVANKQLADQATTNI 180
           R A+  +L+++     +G    A       +N       + +  +   N + +  +  + 
Sbjct: 120 RTAFDEVLSEIVRLEGQGRIEEAVEVVGSRLNTAGTGLNEAVARMTAFNNEQSALSAASA 179

Query: 181 VNAVLAAKISMVLSLLIAVMAAAACGLLLMRSIMAPMQLIVRILDVMRTGDLSTRLSLSR 240
                +++  M+ ++++AV+       +  RSI+ P+Q  V I +V+ +GDL+  + +  
Sbjct: 180 AAIFQSSQAWMIGTIVLAVLLTVVLAWIFTRSIVQPLQQAVSIAEVVASGDLTRHIDIVG 239

Query: 241 KDEFNAVETGFNDMVTELTALVAQAQRSSVQVTTS------VTEIAATSRQQQATATETA 294
           +DE   + T    M   L   +     SS Q+ ++      VTE +     QQ+   E A
Sbjct: 240 RDEPARLLTALRSMQERLRGTIQSISHSSSQLASAAEQLNVVTEDSTRGMNQQSHEIEQA 299

Query: 295 ATTTEIGATSREIAATSRDLVRTMTEVTSAADQASVLAGSGQQGLARMEDTMHQVMGAAN 354
           AT         E+ A   ++ R     + A+  +   A  G+  + R  D++ Q+ G   
Sbjct: 300 ATAVN------EMTAAVDEVARNAVATSEASRDSDATAQHGRNQVIRTVDSIGQLAGDVT 353

Query: 355 LVNAKLAILNEKAGNINQVVVTIVKVADQTNLLSLNAAIEAEKAGEYGRGFAVVATEVRR 414
             +A++  L  +  +I++V+  I  +A+QTNLL+LNAAIEA +AG+ GRGFAVVA EVR 
Sbjct: 354 QTSAEVERLAAQVRDISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRA 413

Query: 415 LADQTAVATYDIEQMVREIQSAVSAGVMGMDKFSEEVRRGMFEVTQVGEQLSQIIHQVQA 474
           LA +T  +T +IEQM+ ++       V  M   +E  R  +      GE L +I   +  
Sbjct: 414 LAHRTQQSTQEIEQMIGDVHQGTDRAVQAMQVSNERARTTLDLARAAGEALEEIAAAISQ 473

Query: 475 LAPRVLMVNEGMQAQATGAEQINQALVQLADASSQTVESLRQASFAIDELSQVAVGLRSG 534
           ++ R L++    + QA  A ++++ LV + D S Q+     Q+S A  EL+++AVGL   
Sbjct: 474 ISERNLVIASASEEQAQVAREVDRNLVNIRDLSLQSSAGASQSSAASQELARLAVGLNGL 533

Query: 535 VSRFKV 540
           V  F+V
Sbjct: 534 VGGFRV 539