Pairwise Alignments

Query, 540 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

Subject, 712 a.a., methyl-accepting chemotaxis protein from Pseudomonas aeruginosa PA14

 Score =  158 bits (400), Expect = 6e-43
 Identities = 109/358 (30%), Positives = 178/358 (49%), Gaps = 12/358 (3%)

Query: 192 VLSLLIAVMAAAACGLLLM----RSIMAPMQLIVRILD--VMRTGDLSTRLSLSRKDEFN 245
           +L + +A +  AA GLL++      I  P++ +V +LD      GDL+ RLS  R DE  
Sbjct: 358 ILGMSLAGLVVAALGLLVVWLVGYGIARPLRQLVGMLDDIAQGEGDLTRRLSSERADELG 417

Query: 246 AVETGFNDMVTELTALVAQAQRSSVQVTTSVTEIAATSRQQQATATETAATTTEIGATSR 305
           ++  GFN  + +L  ++ Q  +S  +V+ S    A  + +      +  A    +     
Sbjct: 418 SIAKGFNTFLGKLQNMIGQVVQSVQKVSDSSEHTADIAIRTNQGVQQQLAEIELVATAVH 477

Query: 306 EIAATSRDLVRTMTEVTSAADQASVLAGSGQQGLARMEDTMHQVMGAANLVNAKLAILNE 365
           E+ AT++D+ R  T    AA+ A   A  G+Q    +E +   +   A+ +   + ++  
Sbjct: 478 EMTATAQDVARNATHAAEAANHADQAAHQGKQ---IVESSSAAIQALASEIGRAVGVVQN 534

Query: 366 KAG---NINQVVVTIVKVADQTNLLSLNAAIEAEKAGEYGRGFAVVATEVRRLADQTAVA 422
            A    NIN ++V I  +A+QTNLL+LNAAIEA +AGE GRGFAVVA EVR LA +T  A
Sbjct: 535 LAKDSENINAILVAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQA 594

Query: 423 TYDIEQMVREIQSAVSAGVMGMDKFSEEVRRGMFEVTQVGEQLSQIIHQVQALAPRVLMV 482
           T +I+ M++++Q      V  M    +     +    Q  E L  I   V  +      +
Sbjct: 595 TEEIQSMIQQLQQGTRDVVKVMQDSQDRTDDSVRHARQAAEALESITQAVSVINDMNTQI 654

Query: 483 NEGMQAQATGAEQINQALVQLADASSQTVESLRQASFAIDELSQVAVGLRSGVSRFKV 540
               + Q+  AE IN+ +  +   ++Q      +AS A  EL+++A   R  V++F+V
Sbjct: 655 ASAAEEQSAVAEDINRNVANIGQVANQVAGGADEASQASAELTRLAEQQRRLVNQFRV 712