Pairwise Alignments

Query, 540 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

Subject, 534 a.a., chemotaxis protein from Herbaspirillum seropedicae SmR1

 Score =  186 bits (472), Expect = 2e-51
 Identities = 146/547 (26%), Positives = 249/547 (45%), Gaps = 43/547 (7%)

Query: 1   MKNWTLRQRILASFAVIIAIMLLMVVVSYSRLLSIESSEEDVRLDALPGVYYSTLVRSAW 60
           + N T+R R+   F +++ +ML M     +RL  + +  +DV  D  P        ++  
Sbjct: 3   LSNVTIRVRLWLGFGLLMVLMLAMAASGIARLGQLNAQMKDVIHDKYP--------KTVV 54

Query: 61  GESYIRTLELIAEG-------QGRPLTKQERDQFQGFDENLQAQMDGYKKSIFDDTDRDS 113
               +  L LIA         +  P  K E ++  G D  ++  +    K + D   R +
Sbjct: 55  AGDIVDQLNLIARSVRNILLLKREPQIKSEYERISGADRAIREDLAQLDKLLTDGDSRAA 114

Query: 114 FALFEKRREAYSRMLADVHAKYDRGDYAGARAEFYGEVNPVWLAGRKQLNDLIVANKQLA 173
                  + AY      V A   +G   GA      EV PV  A     + LI    ++ 
Sbjct: 115 LTTLVTAQNAYFEKRDKVLAMVQQGGKEGAIDMLIDEVRPVQSATMNAADALIRQQHEMM 174

Query: 174 DQATTNIVNAVLAAKISMVLSLLIAVMAAAACGLLLMRSIMAPMQLIVRILDVMRTGDLS 233
             A   + +    A+  ++L     + AAA    ++ RSI AP+   VR+ + +  GDL+
Sbjct: 175 KTAGDEVESNYAQARTLLLLLAAAGLAAAAVIAWMITRSITAPLDRAVRVAETVAAGDLT 234

Query: 234 TRLSLSRKDEFNAVETGFNDMVTELTALVAQAQRSSVQVTTSVTEIAATSRQQQATATET 293
           + +    +DE + +      M   L  +V+Q + S+  + T+ +EIA  +        + 
Sbjct: 235 SAIDAHGRDETSMLLRALKKMNDRLLDIVSQVRVSTDTIATASSEIARGN-------LDL 287

Query: 294 AATTTEIGATSREIAATSRDLVRTMTEVTSAADQASVLAGSGQQGLARMEDTMHQVMGAA 353
           ++ T E  A+  E A++   L  T+ +  S A QAS LAGS      +  + +  V+   
Sbjct: 288 SSRTEEQAASLEETASSMEQLTATVKQNASHAGQASQLAGSASDIARQGGEVVGHVVETM 347

Query: 354 NLVNAKLAILNEKAGNINQVVVTIVKVADQTNLLSLNAAIEAEKAGEYGRGFAVVATEVR 413
             ++A        +  I  ++  I  +A QTN+L+LNAA+EA +AGE GRGFAVVA EVR
Sbjct: 348 GAIDAS-------SKKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVR 400

Query: 414 RLADQTAVATYDIEQMVREIQSAVSAGVMGMDKFSEEVRRGMFEVTQVGEQLSQIIHQVQ 473
            LA ++A A ++I+ ++ +  + V  G     K  E+  R M EV Q  +++ ++++++ 
Sbjct: 401 ALAQRSATAAHEIKALIADSVARVGNG----SKLVEQAGRTMHEVVQSVQRVGEVVNEIS 456

Query: 474 ALAPRVLMVNEGMQAQATGAEQINQALVQLADASSQTVESLRQASFAIDELSQVAVGLRS 533
           +            Q Q+ G EQ+N A+VQ+   + Q    + QA+ A   L   A  L  
Sbjct: 457 SAG----------QEQSAGIEQVNLAIVQMDQVTQQNAALVEQAAAAAQALQDQAAQLAR 506

Query: 534 GVSRFKV 540
            VS FK+
Sbjct: 507 MVSIFKL 513