Pairwise Alignments

Query, 748 a.a., PAS:GGDEF from Pseudomonas syringae pv. syringae B728a

Subject, 809 a.a., sensory box/GGDEF family protein from Marinobacter adhaerens HP15

 Score =  362 bits (928), Expect = e-104
 Identities = 198/550 (36%), Positives = 312/550 (56%), Gaps = 32/550 (5%)

Query: 186 RIVYCNPAFLAITGFTEEEVIGRTPRILQCEDT----SRATLDIIREALSHWRPVEVELL 241
           RI + N  F  +TG+    +IG+ P  L   D     SR     IR  +      + E+ 
Sbjct: 273 RIEFANQKFTQLTGYEAASIIGKHPGALGDNDIENRDSRHLWQSIRLQVQRVGVWQGEVN 332

Query: 242 NTRKDGSQFWVELSIVPVANEKGWFTHWVSVQRDITERKESQQLAQRARLEWEEKLALQS 301
           + R++G +FW +L + P+ +E G  T ++ +  DI+ RK                     
Sbjct: 333 SVRRNGERFWEQLIVTPIKDEAGGTTGYLILGEDISIRK--------------------- 371

Query: 302 RLEERERMSEELTYIAFHDELTSLFNRAYLMNELTTAFETRKSRYERATVLFLDLDGFKV 361
                 R  ++L   A +D LT L NR   ++ L  A    +       V+FLDLD FK 
Sbjct: 372 ------RYEQQLLRQANYDILTGLPNRMLALDRLKLALAQARRESTLVGVMFLDLDNFKH 425

Query: 362 VNDSMGHLAGDQLLKGVANRLQTCVRSNDVLARIGGDEFAILLMGKDQPETAVKMAERIV 421
           +ND++GH AGD LL   A R+ +C+R    +AR+GGDEF ++L G   PE + ++AERI+
Sbjct: 426 INDTLGHDAGDNLLIEAARRISSCLRGTSTVARLGGDEFLVILPGLTGPEASSQVAERIL 485

Query: 422 SQLNTAIQIEGQDIFISCSIGIVSAGESHTKPEELLRDADVAMYSAKKQGRGRWSIFNTS 481
              +    + GQ++F++ SIGI            LL+ AD AMY AK +G+  ++ F   
Sbjct: 486 KTFSPPYILNGQEVFVTTSIGIAIFPTDSDNSGTLLQHADAAMYQAKHKGKSSFAHFAPE 545

Query: 482 MREAAIDTLMIQNALRQALEDKDFLVFYQPIYSGNCEHLVGVEALVRWNHATMGIISPDA 541
           M E + + L +++++R+ALE K+F +++QPI + +   L  VEAL+RWN+  MG++ PD 
Sbjct: 546 MTEVSHERLKMESSMRRALELKEFELYFQPIVNTDSGTLCSVEALLRWNNPAMGMVMPDR 605

Query: 542 FIPIAEDLGIIHELGAWVMHKACSEVQAWRKEFSHLDLRLNVNVSGKELSHPGFVDRVTR 601
           FIP+AE+ G+I  +G WV+ +AC     W KE +  D+ ++VNVS ++   PGF + V  
Sbjct: 606 FIPLAEETGLITPIGEWVLLEACRAAMGW-KEATGKDIGISVNVSPRQFRDPGFTEAVMH 664

Query: 602 IIASTGLPATQLQIEVTESVFLYQPDAIAEILRQIRQLGVRVALDDFGTGYSSLGYIDRY 661
            +A++GL   QL++E+TE + L      AEILRQ+ + G+R+++DDFGTGYS+L Y+  Y
Sbjct: 665 ALATSGLAPEQLELEITERLILDNSIETAEILRQLDKAGIRLSVDDFGTGYSALSYLKSY 724

Query: 662 PIDAVKIDRSFVSRMMTYERSEAIVSSILSLGRALNLDITAEGVETAEQYNLLRKMGCPY 721
           P D +KID+SFV  +M      ++V +I+++  +L L + AEGVE   Q + L+K GC +
Sbjct: 725 PFDTLKIDKSFVQDVMKEPEDASLVRAIINMAHSLGLRVIAEGVEEEAQTHFLKKEGCDF 784

Query: 722 FQGYLLNRPM 731
            QGY  +RP+
Sbjct: 785 SQGYFYSRPL 794