Pairwise Alignments

Query, 341 a.a., TRAP dicarboxylate transporter- DctP subunit from Pseudomonas syringae pv. syringae B728a

Subject, 325 a.a., periplasmic binding protein from Sinorhizobium meliloti 1021

 Score =  141 bits (356), Expect = 2e-38
 Identities = 92/320 (28%), Positives = 153/320 (47%), Gaps = 9/320 (2%)

Query: 5   RKLLIAALPLAFCVSGMAQADVKIKFAEVHPAGYAPVVAEQNMGKKLEEQSKGEISFKMY 64
           R LL AA+ L+ C    A    ++       AG    VA     + +E++S+G +   + 
Sbjct: 4   RHLLTAAV-LSLCAGPAAAQTYQLSHNAA--AGNPKDVASLKFAELVEQKSEGRLKIDVG 60

Query: 65  AGGVLGSEKEVVEQVQSGAVQMTRVSLGIVGPVVPDVNVFNLPFVFHDQAHMRTIIDGQI 124
                G + E +  ++ G +  +  S G    VVP++ +  LPF+F D      ++DG +
Sbjct: 61  GSAQFGDDAETITNMRLGTIAFSANSQGTTSAVVPEIALLGLPFLFQDLKQAEAVMDGPV 120

Query: 125 GQEILDKITNSEFNMVALAWMDGGTRNLY-TKKPVRQISDLKGMKIRVQGNPVFIETIND 183
           G +I       +  +V LAW + G R    +K+ +   SDL GMKIR   + + ++    
Sbjct: 121 GDKIA--AAAEQQGLVVLAWWNNGIRETSNSKRQITAPSDLAGMKIRTPPDQMTVDIFTA 178

Query: 184 MGGNGIAMATGEIFSALQTGVIDGAENNPPTYFQHNHYQNAKFFTMTEHLILPEPIVMSK 243
           +G +   MA  E++ ALQ GV+DG EN          ++   + +MT H     P + SK
Sbjct: 179 LGASPTPMAFSELYIALQQGVVDGQENPLINIHSSKLHEVQPYISMTNHKYESTPFLASK 238

Query: 244 TTWEKLNPEQQALVKKLAREAQMEERVLWDKSSADAETKLKAAGVEFITLTPEQKKAFYD 303
             ++ L PE Q +++  AREA    R +  + +     +L+AAGV+   + P     F  
Sbjct: 239 IVFDALLPEDQQIIRDAAREAGQLNRQMVGEQTTRLRGELEAAGVKINDVDP---APFVQ 295

Query: 304 ATQPVRDKYGAKYKGLIDRI 323
           ATQ V DK+ A+Y  L+D +
Sbjct: 296 ATQSVYDKWRAQYPDLVDEL 315