Pairwise Alignments

Query, 166 a.a., type IV pilus biogenesis protein from Pseudomonas syringae pv. syringae B728a

Subject, 184 a.a., general secretion pathway protein GspH from Vibrio cholerae E7946 ATCC 55056

 Score = 48.9 bits (115), Expect = 5e-11
 Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 5/157 (3%)

Query: 3   HAGFTLIELLIVVALVAILANVATPSFKELIDSSRGLATARELASGIRSARAAAVTRNQI 62
           H GFTL+ELLI VA++  +   A P+F ++   ++    A EL   +  A++ AV RNQ 
Sbjct: 16  HRGFTLLELLITVAVLTTMLLFAAPNFSKVSQQTKMTNLANELQGFLIQAKSEAVFRNQD 75

Query: 63  VTLHAIENDWSNG-WRIILD--ADGKGPDENDPVLIERANSSTARVVDNRKRVEEISFNG 119
           + +H        G W+++L   +D    D ++ V + +        V     + E+ F+ 
Sbjct: 76  LWVHIQGLPSITGQWQLVLSSVSDVAAIDASNTVALLQGQRYQNVFVSKTNTLTEVKFDH 135

Query: 120 LGTLRRRTARTLHVCAADQPVSNYRVIV-APAGRVRV 155
           +     + A +L +  ++    + +V V   AGR++V
Sbjct: 136 V-MGNPQEAGSLFIKPSESAADSIKVTVHNRAGRIKV 171